RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 CIAPIN1Q6FI81 312 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 LIPIQ6XZB0 460 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 C15orf52Q6ZUT6 534 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 LCA5Q86VQ0 697 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 TMEM151BQ8IW70 566 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 ADSSL1Q8N142 457 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 DTX3Q8N9I9 347 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 LINC01356Q8N9X3 169 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 ATL2Q8NHH9 583 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 UBLCP1Q8WVY7 318 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 MAIP1Q8WWC4 291 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 KIFAP3Q92845 792 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 KLHL29Q96CT2 875 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 ZNF317Q96PQ6 595 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 PLEKHG4BQ96PX9 1271 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 CRAMP1Q96RY5 1269 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 FAM167BQ9BTA0 163 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 CCDC28BQ9BUN5 200 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 ZWILCHQ9H900 591 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 ARHGEF3Q9NR81 526 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 CNOT8Q9UFF9 292 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 RPL26L1Q9UNX3 145 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 TFR2Q9UP52 801 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 C2CD2Q9Y426 696 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 SLC4A7Q9Y6M7 1214 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 XDHP47989 1333 aa8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 BAZ2AQ9UIF9 1905 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-204ENST00000349311 SLC12A8A0AV02 714 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 CCDC169A6NNP5 214 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 RAD51CO43502 376 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 NUAK1O60285 661 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 CHGBP05060 677 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 PYGLP06737 847 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 KRT15P19012 456 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 ADORA1P30542 326 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 KRT2P35908 639 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 MTIF2P46199 727 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 DBPQ10586 325 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 GRAPQ13588 217 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 PPP2R5BQ15173 497 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 UAP1Q16222 522 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 PARP6Q2NL67 630 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 GALNTL6Q49A17 601 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 FAM133BQ5BKY9 247 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 PIK3R6Q5UE93 754 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 ANO7Q6IWH7 933 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 USP49Q70CQ1 688 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 ERICH1Q86X53 443 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 MICU3Q86XE3 530 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 COL23A1Q86Y22 540 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 USP38Q8NB14 1042 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 CHST14Q8NCH0 376 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 GRAPLQ8TC17 118 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 PGM2Q96G03 612 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 WNK4Q96J92 1243 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 INPP4AQ96PE3 977 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 TUBGCP2Q9BSJ2 902 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 TARS2Q9BW92 718 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.18□□□□□ -1.19e-7■■□□□ 13.5
UBE2D3-204ENST00000349311 IRF2BPLQ9H1B7 796 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 SLITRK6Q9H5Y7 841 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 POLD4Q9HCU8 107 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 DMAP1Q9NPF5 467 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 TXLNGQ9NUQ3 528 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 TFCP2L1Q9NZI6 479 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 ADAM22Q9P0K1 906 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 VPS54Q9P1Q0 977 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 ATXN10Q9UBB4 475 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 RBPJLQ9UBG7 517 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 SCOCQ9UIL1 159 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 FBXL5Q9UKA1 691 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 TMCO1Q9UM00 188 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 USP15Q9Y4E8 981 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 DUSP10Q9Y6W6 482 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 ABCB11O95342 1321 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 PNPLA7Q6ZV29 1317 aa8.18□□□□□ -1.1
UBE2D3-204ENST00000349311 SLX4Q8IY92 1834 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 F8VZ95 297 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 DVL2O14641 736 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 KCNK3O14649 394 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 ZNF263O14978 683 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 ZSCAN9O15535 394 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 PRPF3O43395 683 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 NCK2O43639 380 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 BBOX1O75936 387 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 FGFR1OPO95684 399 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 OAS1P00973 400 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 AGTP01019 485 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 CHN1P15882 459 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 GNAZP19086 355 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 CALB2P22676 271 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 CXCR5P32302 372 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 ABCD1P33897 745 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 FLT3P36888 993 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 PRCPP42785 496 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 MCAMP43121 646 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 MMP13P45452 471 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 KCNJ2P63252 427 aa8.17□□□□□ -1.1
UBE2D3-204ENST00000349311 MRPS25P82663 173 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms