RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 GCNAQ96QF7 691 aa19.39■□□□□ 0.7
SCARF1-202ENST00000348987 SOX13Q9UN79 622 aa19.39■□□□□ 0.7
SCARF1-202ENST00000348987 I3L4J1 428 aa19.39■□□□□ 0.69
SCARF1-202ENST00000348987 TLR3O15455 904 aaKnown RBP19.39■□□□□ 0.69
SCARF1-202ENST00000348987 CLPTM1O96005 669 aa19.39■□□□□ 0.69
SCARF1-202ENST00000348987 RPL5P46777 297 aaKnown RBP19.39■□□□□ 0.69
SCARF1-202ENST00000348987 NLRP11P59045 1033 aaKnown RBP19.39■□□□□ 0.69
SCARF1-202ENST00000348987 TMPRSS15P98073 1019 aa19.39■□□□□ 0.69
SCARF1-202ENST00000348987 GCNT1Q02742 428 aa19.39■□□□□ 0.69
SCARF1-202ENST00000348987 MAMLD1Q13495 774 aa19.39■□□□□ 0.69
SCARF1-202ENST00000348987 OASLQ15646 514 aaKnown RBP19.39■□□□□ 0.69
SCARF1-202ENST00000348987 NADK2Q4G0N4 442 aa19.39■□□□□ 0.69
SCARF1-202ENST00000348987 ZBTB41Q5SVQ8 909 aa19.39■□□□□ 0.69
SCARF1-202ENST00000348987 NBPF12Q5TAG4 269 aaPredicted RBP19.39■□□□□ 0.69
SCARF1-202ENST00000348987 DRICH1Q6PGQ1 229 aaPredicted RBP19.39■□□□□ 0.69
SCARF1-202ENST00000348987 VSIG10LQ86VR7 867 aa19.39■□□□□ 0.69
SCARF1-202ENST00000348987 CCDC124Q96CT7 223 aaKnown RBP19.39■□□□□ 0.69
SCARF1-202ENST00000348987 WWP1Q9H0M0 922 aa19.39■□□□□ 0.69
SCARF1-202ENST00000348987 SAE1Q9UBE0 346 aaPredicted RBP19.39■□□□□ 0.69
SCARF1-202ENST00000348987 SEPT9Q9UHD8 586 aaPredicted RBP19.39■□□□□ 0.69
SCARF1-202ENST00000348987 FARP1Q9Y4F1 1045 aaPredicted RBP19.39■□□□□ 0.69
SCARF1-202ENST00000348987 SPDYE16A6NNV3 312 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-202ENST00000348987 VWA5AO00534 786 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 IL1BP01584 269 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 VCPP55072 806 aaKnown RBP19.38■□□□□ 0.69
SCARF1-202ENST00000348987 CCNIQ14094 377 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 MAP3K21Q5TCX8 1036 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 SH2D5Q6ZV89 423 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 MON1BQ7L1V2 547 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 MAP7D3Q8IWC1 876 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 AGBL3Q8NEM8 1001 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 ZBED3Q96IU2 234 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-202ENST00000348987 ZBTB45Q96K62 511 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-202ENST00000348987 HAPLN2Q9GZV7 340 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 C1orf21Q9H246 121 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 C1orf112Q9NSG2 853 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 RNF146Q9NTX7 359 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 ZNF232Q9UNY5 417 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 IQANK1A0A1B0GTG1 560 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 TCRBV7S3A2A0A539 114 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 PDE5AO76074 875 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 KRT1P04264 644 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 TNNI1P19237 187 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 GRAMD1BQ3KR37 738 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 TDRD10Q5VZ19 366 aaKnown RBP19.38■□□□□ 0.69
SCARF1-202ENST00000348987 C15orf39Q6ZRI6 1047 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 CEP70Q8NHQ1 597 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 ZFP28Q8NHY6 868 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 CPT1BQ92523 772 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 PHF12Q96QT6 1004 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 EBF4Q9BQW3 602 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 PCDHGB4Q9UN71 923 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 DRG1Q9Y295 367 aaKnown RBP19.38■□□□□ 0.69
SCARF1-202ENST00000348987 CTDP1Q9Y5B0 961 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-202ENST00000348987 PCDHGB5Q9Y5G0 923 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 IKBKGQ9Y6K9 419 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 KCNA2P16389 499 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 SERPINB6P35237 376 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 SLC18A2Q05940 514 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 CYLC2Q14093 348 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-202ENST00000348987 TMC7Q7Z402 723 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 RCOR2Q8IZ40 523 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 TRIM11Q96F44 468 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 SRPK1Q96SB4 655 aaKnown RBP19.38■□□□□ 0.69
SCARF1-202ENST00000348987 GRIP2Q9C0E4 1043 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 IQCGQ9H095 443 aaKnown RBP19.38■□□□□ 0.69
SCARF1-202ENST00000348987 PCDH9Q9HC56 1237 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 PDLIM7Q9NR12 457 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 SNCAIPQ9Y6H5 919 aa19.38■□□□□ 0.69
SCARF1-202ENST00000348987 PSME4Q14997 1843 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 KLF11O14901 512 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 HLA-DRAP01903 254 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 ATP6V1B1P15313 513 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 PCSK6P29122 969 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 GDF10P55107 478 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 ZNF200P98182 395 aaPredicted RBP19.37■□□□□ 0.69
SCARF1-202ENST00000348987 TLR1Q15399 786 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 SEZ6Q53EL9 994 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 SAMD3Q8N6K7 520 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 POU5F2Q8N7G0 328 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 MTMR14Q8NCE2 650 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 ICA1LQ8NDH6 482 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 JDP2Q8WYK2 163 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 APOBEC3GQ9HC16 384 aaKnown RBP19.37■□□□□ 0.69
SCARF1-202ENST00000348987 LZTS1Q9Y250 596 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 PCDHB2Q9Y5E7 798 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 CAPN8A6NHC0 703 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 CYB561D2O14569 222 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 COPEO14579 308 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 AP1G1O43747 822 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 PEX10O60683 326 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 VNN1O95497 513 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 EMP3P54852 163 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 PRKCEQ02156 737 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 BRDTQ58F21 947 aaPredicted RBP19.37■□□□□ 0.69
SCARF1-202ENST00000348987 DLK2Q6UY11 383 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 PPIL6Q8IXY8 311 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 PIP4K2CQ8TBX8 421 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 GAB3Q8WWW8 586 aa19.37■□□□□ 0.69
SCARF1-202ENST00000348987 TMEM143Q96AN5 459 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms