RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 COL23A1Q86Y22 540 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-202ENST00000348513 CAVIN3Q969G5 261 aa11.46□□□□□ -0.57
SMARCE1-202ENST00000348513 MAGEB18Q96M61 343 aa11.46□□□□□ -0.57
SMARCE1-202ENST00000348513 SPOCK3Q9BQ16 436 aa11.46□□□□□ -0.57
SMARCE1-202ENST00000348513 SYNDIG1Q9H7V2 258 aa11.46□□□□□ -0.57
SMARCE1-202ENST00000348513 GRIN3BO60391 1043 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 PDE9AO76083 593 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 CETPP11597 493 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 UCHL3P15374 230 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 CLK1P49759 484 aaKnown RBP11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 GALCP54803 685 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 GJA9P57773 515 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 ORC1Q13415 861 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 EFTUD2Q15029 972 aaKnown RBP eCLIP11.46□□□□□ -0.581e-6■■■■□ 25.2
SMARCE1-202ENST00000348513 DGUOKQ16854 277 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 PRMT6Q96LA8 375 aaPredicted RBP11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 GPBP1L1Q9HC44 474 aaPredicted RBP11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 PTTG2Q9NZH5 202 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 ZNF224Q9NZL3 707 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 HLA-DRAP01903 254 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 RFX5P48382 616 aaPredicted RBP11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 SERPINH1P50454 418 aaKnown RBP11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 NR1H2P55055 460 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 TRMT5Q32P41 509 aaKnown RBP11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 GLRA4Q5JXX5 417 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 CYP4A22Q5TCH4 519 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 IL31Q6EBC2 164 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 STK33Q9BYT3 514 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 MUC3BQ9H195 1237 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 BAIAP2Q9UQB8 552 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 PFASO15067 1338 aa11.46□□□□□ -0.58
SMARCE1-202ENST00000348513 PGK2P07205 417 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 ITGA2BP08514 1039 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 GYS1P13807 737 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 TAP1Q03518 808 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 SLC9A5Q14940 896 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 DGKDQ16760 1214 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 SGSM1Q2NKQ1 1148 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 TTC23LQ6PF05 361 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 C16orf62Q7Z3J2 963 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 CCDC28AQ8IWP9 274 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 S100ZQ8WXG8 99 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 C19orf60Q96EN9 201 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 BTBD6Q96KE9 485 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 NSMCE3Q96MG7 304 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 IRF2BPLQ9H1B7 796 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 COPG2Q9UBF2 871 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 VPS4AQ9UN37 437 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 SLC37A4O43826 429 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 CYBBP04839 570 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 APRTP07741 180 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 RAD51Q06609 339 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 SLC7A14Q8TBB6 771 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 INPP5DQ92835 1189 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 ZNF512BQ96KM6 892 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 BBS2Q9BXC9 721 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 GPR75-ASB3A0A0A6YYF3 556 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 TAL1P17542 331 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 GNL1P36915 607 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 GOLGA7BQ2TAP0 167 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 LIN52Q52LA3 116 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 LRRC6Q86X45 466 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 OR8H2Q8N162 312 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 RMND5BQ96G75 393 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 KLHL32Q96NJ5 620 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 SENP7Q9BQF6 1050 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 TIPINQ9BVW5 301 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 MYRFQ9Y2G1 1151 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 PDS5AQ29RF7 1337 aaKnown RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 CD163L1Q9NR16 1453 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 PDZK1P1A8MUH7 402 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 FDPSP14324 419 aaKnown RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 HSD17B3P37058 310 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 ETFBP38117 255 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 NCKAP1LP55160 1127 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 MORF4L2Q15014 288 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 ACAP1Q15027 740 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 HIF1AQ16665 826 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 PACS1Q6VY07 963 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 TARS2Q9BW92 718 aaKnown RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 TSSK1BQ9BXA7 367 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 CNTNAP4Q9C0A0 1308 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 SPTLC1O15269 473 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 CTDNEP1O95476 244 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 SERPIND1P05546 499 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 NFIAQ12857 509 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 XRCC4Q13426 336 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 PGBD3Q8N328 593 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 SLC25A41Q8N5S1 370 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 MINDY2Q8NBR6 621 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 NUDT12Q9BQG2 462 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 ROPN1BQ9BZX4 212 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 ROPN1Q9HAT0 212 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 ERAP1Q9NZ08 941 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 SENP1Q9P0U3 644 aa11.45□□□□□ -0.58
SMARCE1-202ENST00000348513 TMEM120BA0PK00 339 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 AKAP10O43572 662 aa11.44□□□□□ -0.58
SMARCE1-202ENST00000348513 RHOBTB3O94955 611 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms