RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 LRRC4BQ9NT99 713 aa19.24■□□□□ 0.67
UBE3C-201ENST00000348165 TRMT6Q9UJA5 497 aaKnown RBP19.24■□□□□ 0.67
UBE3C-201ENST00000348165 FAM95CA0A1B0GW59 222 aa19.24■□□□□ 0.67
UBE3C-201ENST00000348165 TBKBP1A7MCY6 615 aa19.24■□□□□ 0.67
UBE3C-201ENST00000348165 IRF6O14896 467 aa19.24■□□□□ 0.67
UBE3C-201ENST00000348165 SRP72O76094 671 aaKnown RBP19.24■□□□□ 0.67
UBE3C-201ENST00000348165 ARL4DP49703 201 aa19.24■□□□□ 0.67
UBE3C-201ENST00000348165 FKBP1AP62942 108 aaKnown RBP19.24■□□□□ 0.67
UBE3C-201ENST00000348165 C11orf63Q6NUN7 778 aa19.24■□□□□ 0.67
UBE3C-201ENST00000348165 PRUNE1Q86TP1 453 aa19.24■□□□□ 0.67
UBE3C-201ENST00000348165 PCYOX1LQ8NBM8 494 aa19.24■□□□□ 0.67
UBE3C-201ENST00000348165 PURBQ96QR8 312 aaKnown RBP19.24■□□□□ 0.67
UBE3C-201ENST00000348165 SFMBT1Q9UHJ3 866 aa19.24■□□□□ 0.67
UBE3C-201ENST00000348165 MTO1Q9Y2Z2 717 aaKnown RBP19.24■□□□□ 0.67
UBE3C-201ENST00000348165 VWDEQ8N2E2 1590 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 KLHL2O95198 593 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 OCA2Q04671 838 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 INPP5AQ14642 412 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 ZPBP2Q6X784 338 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 CCDC60Q8IWA6 550 aaPredicted RBP19.23■□□□□ 0.67
UBE3C-201ENST00000348165 NR1H4Q96RI1 486 aaPredicted RBP19.23■□□□□ 0.67
UBE3C-201ENST00000348165 ASB7Q9H672 318 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 RPLP2P05387 115 aaKnown RBP19.23■□□□□ 0.67
UBE3C-201ENST00000348165 DDX5P17844 614 aaKnown RBP19.23■□□□□ 0.67
UBE3C-201ENST00000348165 TAF2Q6P1X5 1199 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 ACTRT1Q8TDG2 376 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 CELF6Q96J87 481 aaKnown RBP19.23■□□□□ 0.67
UBE3C-201ENST00000348165 TMEM131LA2VDJ0 1609 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 ANKRD63C9JTQ0 380 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 CBX4O00257 560 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 KRT72Q14CN4 511 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 DNAL1Q4LDG9 190 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 COPS5Q92905 334 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.23■□□□□ 0.67
UBE3C-201ENST00000348165 AKAP10O43572 662 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 GLRBP48167 497 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 C1QBPQ07021 282 aaKnown RBP19.23■□□□□ 0.67
UBE3C-201ENST00000348165 ADIGQ0VDE8 80 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 DDX39BQ13838 428 aaKnown RBP19.23■□□□□ 0.67
UBE3C-201ENST00000348165 CEP41Q9BYV8 373 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 FRMD8P1Q9BZ68 369 aaPredicted RBP19.23■□□□□ 0.67
UBE3C-201ENST00000348165 NMRK2Q9NPI5 230 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 TEKT2Q9UIF3 430 aa19.23■□□□□ 0.67
UBE3C-201ENST00000348165 CLASP2O75122 1294 aaKnown RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 UBA1P22314 1058 aaKnown RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 HNRNPLLQ8WVV9 542 aaKnown RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 WNK4Q96J92 1243 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 KCNK16Q96T55 309 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 NT5MQ9NPB1 228 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 A0A0A6YYK5 440 aaPredicted RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 SKAP2O75563 359 aaPredicted RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 SOAT2O75908 522 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 FKBP9O95302 570 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 MZF1P28698 734 aaPredicted RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 SLC12A3P55017 1021 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 CYTH1Q15438 398 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 FKBP9P1Q75LS8 142 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 BRSK2Q8IWQ3 736 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 SCUBE3Q8IX30 993 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 IARS2Q9NSE4 1012 aaKnown RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 WWOXQ9NZC7 414 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 RHOCP08134 193 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 RARGP13631 454 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 ZC3H12BQ5HYM0 836 aaKnown RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 TIGD7Q6NT04 549 aaPredicted RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 PRPF39Q86UA1 669 aaKnown RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 VSIG10LQ86VR7 867 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 MKL1Q969V6 931 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 CMTM5Q96DZ9 223 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 OTUB1Q96FW1 271 aaPredicted RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 MTMR9Q96QG7 549 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 CIPCQ9C0C6 399 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 CDC42EP4Q9H3Q1 356 aaKnown RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 LRRC40Q9H9A6 602 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 CYP2F1P24903 491 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 PSEN2P49810 448 aa19.22■□□□□ 0.67
UBE3C-201ENST00000348165 FSCN1Q16658 493 aaKnown RBP19.22■□□□□ 0.67
UBE3C-201ENST00000348165 KLC1Q07866 573 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 CCNG2Q16589 344 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 FAM171A1Q5VUB5 890 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 GLIS3Q8NEA6 775 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 FAM129AQ9BZQ8 928 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 VPS9D1Q9Y2B5 631 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 CRYMQ14894 314 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 TTLL9Q3SXZ7 439 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 ADAM32Q8TC27 787 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 FICDQ9BVA6 458 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 FHDC1Q9C0D6 1143 aaPredicted RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 PRDM4Q9UKN5 801 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 FAM32AQ9Y421 112 aaKnown RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 MRPL42Q9Y6G3 142 aaKnown RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 KDM4FA0A1W2PPD8 638 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 NCF1BA6NI72 391 aaPredicted RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 LRRIQ3A6PVS8 624 aaPredicted RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 NCF1CA8MVU1 366 aaPredicted RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 LZTS3O60299 673 aaPredicted RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 LGALS2P05162 132 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 NCF1P14598 390 aaPredicted RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 RAG1P15918 1043 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 GCNT1Q02742 428 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms