RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 HDAC4P56524 1084 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 CCNG2Q16589 344 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 TAZQ16635 292 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 CTXN3Q4LDR2 81 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 SLC39A12Q504Y0 691 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 MFSD5Q6N075 450 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 SCYL2Q6P3W7 929 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 CYP4V2Q6ZWL3 525 aaPredicted RBP22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 GPRIN1Q7Z2K8 1008 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 CCDC105Q8IYK2 499 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 SCML4Q8N228 414 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 TMEM199Q8N511 208 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 C1orf54Q8WWF1 131 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 CASKIN2Q8WXE0 1202 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 IRGQQ8WZA9 623 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 NDRG1Q92597 394 aaKnown RBP22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 SLC2A13Q96QE2 648 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 POPDC2Q9HBU9 364 aa22.44■■□□□ 1.18
TSPAN3-202ENST00000346495 ZBED1O96006 694 aa22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 RABGGTBP53611 331 aa22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 CUL1Q13616 776 aa22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 SLC25A52Q3SY17 297 aa22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 RAB6CQ53S08 254 aa22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 JAMLQ86YT9 394 aa22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 SLCO2A1Q92959 643 aa22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 TOP1MTQ969P6 601 aa22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 FUBP3Q96I24 572 aaKnown RBP eCLIP22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 OXCT2Q9BYC2 517 aaPredicted RBP22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 RAB6CQ9H0N0 254 aa22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 STAP1Q9ULZ2 295 aa22.43■■□□□ 1.18
TSPAN3-202ENST00000346495 H7C4K7 107 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 OR4Q2P0C623 313 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 MYBL2P10244 700 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 CSF2RAP15509 400 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 ITGB8P26012 769 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 ALDH7A1P49419 539 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 SULT1E1P49888 294 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 IFT81Q8WYA0 676 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 SEC14L1Q92503 715 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 CHST7Q9NS84 486 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 FEZ2Q9UHY8 353 aaPredicted RBP22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 ESYT3A0FGR9 886 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 NT5C1B-RDH14C9J2C7 533 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 MDM4O15151 490 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 USP17L7P0C7H9 530 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 TFE3P19532 575 aaPredicted RBP22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 CARSP49589 748 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 EPHB4P54760 987 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 PDK2Q15119 407 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 DCAF6Q58WW2 860 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 PM20D1Q6GTS8 502 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 MAP7D3Q8IWC1 876 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 GSPT2Q8IYD1 628 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 AENQ8WTP8 325 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 GRK7Q8WTQ7 553 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 NPY6RQ99463 290 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 ERP44Q9BS26 406 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 TRIM51Q9BSJ1 452 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 CWH43Q9H720 699 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 FAM114A2Q9NRY5 505 aa22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 R3HDM2Q9Y2K5 976 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-202ENST00000346495 ENDOD1O94919 500 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 ECEL1O95672 775 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 CYP2F1P24903 491 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 GRIK1P39086 918 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 ARSEP51690 589 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 CDH6P55285 790 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 SNX1Q13596 522 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 VSTM1Q6UX27 236 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 ATG4AQ8WYN0 398 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 NT5C3BQ969T7 300 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 ABI2Q9NYB9 513 aaPredicted RBP22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 PCDHB5Q9Y5E4 795 aa22.41■■□□□ 1.18
TSPAN3-202ENST00000346495 COL4A6Q14031 1691 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 YJEFN3A6XGL0 299 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 E7ENQ6 273 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 CAPN9O14815 690 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 LTFP02788 710 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 PBX3P40426 434 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 KCNJ1P48048 391 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 ADCY2Q08462 1091 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 KRT81Q14533 505 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 ERMARDQ5T6L9 678 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 EMBQ6PCB8 327 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 HFE2Q6ZVN8 426 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 SYDE1Q6ZW31 735 aaPredicted RBP22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 ANKS3Q6ZW76 656 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 HDXQ7Z353 690 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 VSIG1Q86XK7 387 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 ATL2Q8NHH9 583 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 TTPALQ9BTX7 342 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 SNRNP25Q9BV90 132 aaKnown RBP22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 TRIM62Q9BVG3 475 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 RRN3Q9NYV6 651 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 NFU1Q9UMS0 254 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 USP3Q9Y6I4 520 aa22.4■■□□□ 1.18
TSPAN3-202ENST00000346495 BAIAP3O94812 1187 aa22.39■■□□□ 1.18
TSPAN3-202ENST00000346495 CD48P09326 243 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms