RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 UQCRHP07919 91 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 HAPLN1P10915 354 aaPredicted RBP13.28□□□□□ -0.28
CT55-202ENST00000344129 MAGEA11P43364 429 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 ATXN1P54253 815 aaKnown RBP13.28□□□□□ -0.28
CT55-202ENST00000344129 PITX1P78337 314 aaPredicted RBP13.28□□□□□ -0.28
CT55-202ENST00000344129 SLC25A11Q02978 314 aaKnown RBP13.28□□□□□ -0.28
CT55-202ENST00000344129 SHHQ15465 462 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 DCAF6Q58WW2 860 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 KCNT1Q5JUK3 1230 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 SEL1L2Q5TEA6 688 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 SYPL2Q5VXT5 272 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 RASGEF1CQ8N431 466 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 EDEM1Q92611 657 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 C8orf48Q96LL4 319 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 PEBP4Q96S96 227 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 TBCBQ99426 244 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 DDX23Q9BUQ8 820 aaKnown RBP13.28□□□□□ -0.28
CT55-202ENST00000344129 ALG13Q9NP73 1137 aaKnown RBP13.28□□□□□ -0.28
CT55-202ENST00000344129 PNPLA8Q9NP80 782 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 COX16Q9P0S2 106 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 MTUS1Q9ULD2 1270 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.28□□□□□ -0.28
CT55-202ENST00000344129 USP3Q9Y6I4 520 aa13.28□□□□□ -0.28
CT55-202ENST00000344129 LINC01553A4QN01 128 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 CARNS1A5YM72 827 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 PGRMC1O00264 195 aaKnown RBP13.27□□□□□ -0.28
CT55-202ENST00000344129 SEC24AO95486 1093 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 LTFP02788 710 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 KRT1P04264 644 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 MATKP42679 507 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 PGFP49763 221 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 SULT1E1P49888 294 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 USP46P62068 366 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 MTMR3Q13615 1198 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 LONRF2Q1L5Z9 754 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 TEX35Q5T0J7 233 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 PM20D1Q6GTS8 502 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 SCYL2Q6P3W7 929 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 CCDC50Q8IVM0 306 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 NUP93Q8N1F7 819 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 NOA1Q8NC60 698 aaKnown RBP13.27□□□□□ -0.28
CT55-202ENST00000344129 ACTRT1Q8TDG2 376 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 GIPC2Q8TF65 315 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 RNF25Q96BH1 459 aaPredicted RBP13.27□□□□□ -0.28
CT55-202ENST00000344129 SLC2A13Q96QE2 648 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 C17orf80Q9BSJ5 609 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 AP1M1Q9BXS5 423 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 ZBP1Q9H171 429 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 POPDC2Q9HBU9 364 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 MRPL17Q9NRX2 175 aaKnown RBP13.27□□□□□ -0.28
CT55-202ENST00000344129 CALCOCO1Q9P1Z2 691 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 USP18Q9UMW8 372 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 NR2E3Q9Y5X4 410 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 PLXNA4Q9HCM2 1894 aa13.27□□□□□ -0.28
CT55-202ENST00000344129 CAPN9O14815 690 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 SART1O43290 800 aaKnown RBP13.27□□□□□ -0.29
CT55-202ENST00000344129 TRUB2O95900 331 aaKnown RBP13.27□□□□□ -0.29
CT55-202ENST00000344129 NCAM1P13591 858 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 BMPR1AP36894 532 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 PTPN9P43378 593 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 HDAC4P56524 1084 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 SMARCB1Q12824 385 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 ACAP1Q15027 740 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 HADHQ16836 314 aaKnown RBP13.27□□□□□ -0.29
CT55-202ENST00000344129 OTUD1Q5VV17 481 aaPredicted RBP13.27□□□□□ -0.29
CT55-202ENST00000344129 ARCQ7LC44 396 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 ANKS1BQ7Z6G8 1248 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 KATNAL2Q8IYT4 538 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 SPATA4Q8NEY3 305 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 ADAM32Q8TC27 787 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 C2orf15Q8WU43 125 aaKnown RBP13.27□□□□□ -0.29
CT55-202ENST00000344129 HSPH1Q92598 858 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 RBM12Q9NTZ6 932 aaKnown RBP13.27□□□□□ -0.29
CT55-202ENST00000344129 RNF14Q9UBS8 474 aa13.27□□□□□ -0.29
CT55-202ENST00000344129 TCRBV7S2A1N4TA0A589 114 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 TEX28O15482 410 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 GLI1P08151 1106 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 NOS2P35228 1153 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 PCK1P35558 622 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 SMC1AQ14683 1233 aaKnown RBP13.26□□□□□ -0.29
CT55-202ENST00000344129 ERCC6LQ2NKX8 1250 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 SLC25A52Q3SY17 297 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 LRRC38Q5VT99 294 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 BSPRYQ5W0U4 402 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 TMC7Q7Z402 723 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 IRGQQ8WZA9 623 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 RAPGEF5Q92565 580 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 GOLGA1Q92805 767 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 HERPUD2Q9BSE4 406 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 C11orf84Q9BUA3 381 aaPredicted RBP13.26□□□□□ -0.29
CT55-202ENST00000344129 EPC1Q9H2F5 836 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 CYP4F11Q9HBI6 524 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 GPATCH2LQ9NWQ4 482 aa13.26□□□□□ -0.29
CT55-202ENST00000344129 AFF4Q9UHB7 1163 aaKnown RBP13.26□□□□□ -0.29
CT55-202ENST00000344129 MYO16Q9Y6X6 1858 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.25□□□□□ -0.29
CT55-202ENST00000344129 A0A1W2PQH9 124 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 LRRD1A4D1F6 860 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 M0QYT0 321 aa13.25□□□□□ -0.29
CT55-202ENST00000344129 KRIT1O00522 736 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms