RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 APOL1O14791 398 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 GABBR2O75899 941 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 PDK4Q16654 411 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 LDLRAD1Q5T700 205 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 PQLC3Q8N755 202 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 DCAKDQ8WVC6 231 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 LENG1Q96BZ8 264 aaPredicted RBP15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 KLHL29Q96CT2 875 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 TRIP11Q15643 1979 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 A8MXQ7 604 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 ENDOD1O94919 500 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 ZBED1O96006 694 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 LCP1P13796 627 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 STIP1P31948 543 aaKnown RBP15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 SLC6A3Q01959 620 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 BNIP1Q12981 228 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 DGKDQ16760 1214 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 KBTBD12Q3ZCT8 623 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 ADGRD1Q6QNK2 874 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 ANKLE1Q8NAG6 615 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 PCDH19Q8TAB3 1148 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 EMID1Q96A84 441 aaPredicted RBP15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 SNX27Q96L92 541 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 SLC17A7Q9P2U7 560 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 GJD2Q9UKL4 321 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 KIAA1257Q9ULG3 409 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 STK38LQ9Y2H1 464 aa15.51■□□□□ 0.07
VIPAS39-202ENST00000343765 TCRBV9S1A1TA0A576 114 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 F5H423 210 aaPredicted RBP15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 ATP2A2P16615 1042 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 KCNJ11Q14654 390 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 DCAF4L1Q3SXM0 396 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 PRAMEF19Q5SWL8 479 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 GPR142Q7Z601 462 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 CCDC110Q8TBZ0 833 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 TCP10LQ8TDR4 215 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 KHSRPQ92945 711 aaKnown RBP eCLIP15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 TBC1D31Q96DN5 1066 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 USP29Q9HBJ7 922 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 IKBKGQ9Y6K9 419 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 RBM47A0AV96 593 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 CHUKO15111 745 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 RECQL4O94761 1208 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 APRTP07741 180 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 HDAC4P56524 1084 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 PTK7Q13308 1070 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 E2F5Q15329 346 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 ZNF618Q5T7W0 954 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 SLC27A1Q6PCB7 646 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 ZNF410Q86VK4 478 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 AGGF1Q8N302 714 aaeCLIP15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 GBP7Q8N8V2 638 aaPredicted RBP15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 GRAMD1AQ96CP6 724 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 MAML3Q96JK9 1138 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 PLCD4Q9BRC7 762 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 GCOM2Q9BZD3 368 aaPredicted RBP15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 DHX35Q9H5Z1 703 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 PPCSQ9HAB8 311 aa15.5■□□□□ 0.07
VIPAS39-202ENST00000343765 PLXNA1Q9UIW2 1896 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 DYNC1LI2O43237 492 aaPredicted RBP15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 MGRN1O60291 552 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 FAM155BO75949 473 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 ATP6V1G2O95670 118 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 STAU1O95793 577 aaKnown RBP15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 NQO1P15559 274 aaKnown RBP15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 ACVR2BQ13705 512 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 SOWAHAQ2M3V2 549 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 DUSP28Q4G0W2 176 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 PKDCCQ504Y2 493 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 BOLA3Q53S33 107 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 RNF43Q68DV7 783 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 CTAGE3PQ8IX95 158 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 BEST2Q8NFU1 509 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 ZC3H15Q8WU90 426 aaKnown RBP15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 SLC35F5Q8WV83 523 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 BRI3BPQ8WY22 251 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 ZNF75CPQ92670 426 aaPredicted RBP15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 ERP27Q96DN0 273 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 CYTH2Q99418 400 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 MYLK2Q9H1R3 596 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 ADAMTS10Q9H324 1103 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 GOLGA2P5Q9HBQ8 144 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 STARD13Q9Y3M8 1113 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 NR2E3Q9Y5X4 410 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 KAT6AQ92794 2004 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 ZSWIM8A7E2V4 1837 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 LMO2P25791 158 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 FAAP100Q0VG06 881 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 PDK2Q15119 407 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 STILQ15468 1287 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 PRPF39Q86UA1 669 aaKnown RBP15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 NT5DC4Q86YG4 428 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 TTC39CQ8N584 583 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 DHRS4Q9BTZ2 278 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 SLC4A5Q9BY07 1137 aa15.49■□□□□ 0.07
VIPAS39-202ENST00000343765 CFAP73A6NFT4 308 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 EDF1O60869 148 aaKnown RBP15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 MT-ND3P03897 115 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 INHBAP08476 426 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms