RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 COCHO43405 550 aa17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 TBCAO75347 108 aaKnown RBP17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 ZNF217O75362 1048 aa17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 ANXA13P27216 316 aa17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 RBP5P82980 135 aa17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 GRIN1Q05586 938 aa17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 ANO4Q32M45 955 aa17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 CACTINQ8WUQ7 758 aaKnown RBP17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 MRGPRX1Q96LB2 322 aa17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 RBAKQ9NYW8 714 aaPredicted RBP17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 FNDC3AQ9Y2H6 1198 aaKnown RBP17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 MUC22E2RYF6 1773 aaPredicted RBP17.43■□□□□ 0.38
NECTIN1-202ENST00000340882 A0A087WV48 116 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 GOLGA8CPA6NN73 597 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 WASH3PC4AMC7 463 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 TRIM66O15016 1216 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 NDUFS2O75306 463 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 PPP3CCP48454 512 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 POSTNQ15063 836 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 MDH1BQ5I0G3 518 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 BTBD8Q5XKL5 378 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 DDX42Q86XP3 938 aaKnown RBP eCLIP17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 CHPFQ8IZ52 775 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 ZCCHC9Q8N567 271 aaKnown RBP17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 OR5B17Q8NGF7 314 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 MYCBPAPQ8TBZ2 947 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 C8orf48Q96LL4 319 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 CEP295NLQ96MC4 621 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 GABRG3Q99928 467 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 PRDM16Q9HAZ2 1276 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 SPHK2Q9NRA0 654 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 TBC1D7Q9P0N9 293 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 SUSD2Q9UGT4 822 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 BTBD3Q9Y2F9 522 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 NUMA1Q14980 2115 aa17.42■□□□□ 0.38
NECTIN1-202ENST00000340882 CLDN5O00501 218 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 CILPO75339 1184 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 GNSP15586 552 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 WARSP23381 471 aaKnown RBP17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 ABCD1P33897 745 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 C19orf57Q0VDD7 668 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 RILPL1Q5EBL4 403 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 SYCP2LQ5T4T6 812 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 TDRD10Q5VZ19 366 aaKnown RBP17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 ARL6IP4Q66PJ3 421 aaKnown RBP17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 DPH6Q7L8W6 267 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 DYMQ7RTS9 669 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 DNASE2BQ8WZ79 361 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 OTUB2Q96DC9 234 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 CALML4Q96GE6 196 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 HPDLQ96IR7 371 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 MRPL45Q9BRJ2 306 aaKnown RBP17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 CBWD1Q9BRT8 395 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 GAREM1Q9H706 876 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 CCSER2Q9H7U1 834 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 TM7SF3Q9NS93 570 aa17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 CHORDC1Q9UHD1 332 aaPredicted RBP17.41■□□□□ 0.38
NECTIN1-202ENST00000340882 TP53BP1Q12888 1972 aaPredicted RBP17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 A0A1B0GTW7 788 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 IRF1P10914 325 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 DDIT3P35638 169 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 UBA7P41226 1012 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 PGFP49763 221 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 CASP5P51878 434 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 WDR45BQ5MNZ6 344 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 MCTP1Q6DN14 999 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 KIAA1324Q6UXG2 1013 aaKnown RBP17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 DBX2Q6ZNG2 339 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 HS2ST1Q7LGA3 356 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 SCUBE3Q8IX30 993 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 PIP4K2CQ8TBX8 421 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 NOC3LQ8WTT2 800 aaKnown RBP17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 LARP4BQ92615 738 aaKnown RBP17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 FOXJ1Q92949 421 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 TOE1Q96GM8 510 aaKnown RBP17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 FGFBP2Q9BYJ0 223 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 ZDHHC5Q9C0B5 715 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 ZNF518BQ9C0D4 1074 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 MIR1-1HGQ9H1L0 117 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 DPEP3Q9H4B8 488 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 PCIF1Q9H4Z3 704 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 DNAJC17Q9NVM6 304 aaKnown RBP17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 SLCO1B1Q9Y6L6 691 aa17.4■□□□□ 0.38
NECTIN1-202ENST00000340882 KNTC1P50748 2209 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 KCNJ18B7U540 433 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 GREM1O60565 184 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 TMEM191BP0C7N4 346 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 ITPKBP27987 946 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 CD6P30203 668 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 MAPRE1Q15691 268 aaKnown RBP17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 HLA-BQ31612 363 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 GRAMD4Q6IC98 578 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 SCAMP5Q8TAC9 235 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 SLC39A7Q92504 469 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 HVCN1Q96D96 273 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 P2RY11Q96G91 374 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 AK8Q96MA6 479 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 DCBLD2Q96PD2 775 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 SLITRK1Q96PX8 696 aa17.39■□□□□ 0.37
NECTIN1-202ENST00000340882 UBL7Q96S82 380 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms