RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SERPINC1P01008 464 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 LCP1P13796 627 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 GPD2P43304 727 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 TUBP50607 506 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 ZNF77Q15935 545 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 PM20D1Q6GTS8 502 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 LRSAM1Q6UWE0 723 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 SCD5Q86SK9 330 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 NEK11Q8NG66 645 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 SH3RF2Q8TEC5 729 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 NDRG1Q92597 394 aaKnown RBP16.04■□□□□ 0.16
UBE3B-201ENST00000340074 PBXIP1Q96AQ6 731 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 NAP1L5Q96NT1 182 aaPredicted RBP16.04■□□□□ 0.16
UBE3B-201ENST00000340074 LRFN3Q9BTN0 628 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 ULBP1Q9BZM6 244 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 NLRC4Q9NPP4 1024 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 SMPD4Q9NXE4 827 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 NAGPAQ9UK23 515 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 CPQQ9Y646 472 aa16.04■□□□□ 0.16
UBE3B-201ENST00000340074 A0A1B0GTH6 734 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 GABBR2O75899 941 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 ZBED1O96006 694 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 MBL2P11226 248 aaPredicted RBP16.03■□□□□ 0.16
UBE3B-201ENST00000340074 PSEN1P49768 467 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 JAM2P57087 298 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 BPIFB4P59827 614 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 USP4Q13107 963 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 MTF1Q14872 753 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 MEA1Q16626 185 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 ARHGAP29Q52LW3 1261 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 SLC44A4Q53GD3 710 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 BMP8AQ7Z5Y6 402 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 SIX6OS1Q8N1H7 587 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 DNASE1L2Q92874 299 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 NACA2Q9H009 215 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 TSPY26PQ9H489 355 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 CYLDQ9NQC7 956 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 ARHGEF3Q9NR81 526 aa16.03■□□□□ 0.16
UBE3B-201ENST00000340074 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.03■□□□□ 0.16
UBE3B-201ENST00000340074 THG1LQ9NWX6 298 aaKnown RBP16.03■□□□□ 0.16
UBE3B-201ENST00000340074 LEFTY2O00292 366 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 TBX18O95935 607 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 RARGP13631 454 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 TCF3P15923 654 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 CC2D1AQ6P1N0 951 aaPredicted RBP16.02■□□□□ 0.16
UBE3B-201ENST00000340074 BHLHA9Q7RTU4 235 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 PASD1Q8IV76 773 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 ZFRQ96KR1 1074 aaKnown RBP16.02■□□□□ 0.16
UBE3B-201ENST00000340074 HSFY1Q96LI6 401 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 MFSD1Q9H3U5 465 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 TRPV5Q9NQA5 729 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 CNGB3Q9NQW8 809 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 ST7Q9NRC1 585 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 HEBP1Q9NRV9 189 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 GKN1Q9NS71 199 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 NUDT5Q9UKK9 219 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 PCDHGC3Q9UN70 934 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 DAAM1Q9Y4D1 1078 aa16.02■□□□□ 0.16
UBE3B-201ENST00000340074 GFPT2O94808 682 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 CYP11B1P15538 503 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 KRT9P35527 623 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 YWHAGP61981 247 aaKnown RBP eCLIP16.02■□□□□ 0.15
UBE3B-201ENST00000340074 FANCCQ00597 558 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 PLCB2Q00722 1185 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 TNK2Q07912 1038 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 NR1I3Q14994 352 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 MLF2Q15773 248 aaPredicted RBP16.02■□□□□ 0.15
UBE3B-201ENST00000340074 TRIM68Q6AZZ1 485 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 ARHGAP18Q8N392 663 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 CSGALNACT1Q8TDX6 532 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 SPAG5Q96R06 1193 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 FAM83CQ9BQN1 747 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 GTSE1Q9NYZ3 720 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 CLIC5Q9NZA1 410 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 CYTH4Q9UIA0 394 aa16.02■□□□□ 0.15
UBE3B-201ENST00000340074 ZDBF2Q9HCK1 2354 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 F5P12259 2224 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 MDM4O15151 490 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 RALAP11233 206 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 SOX5P35711 763 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 ATP5C1P36542 298 aaKnown RBP16.01■□□□□ 0.15
UBE3B-201ENST00000340074 RPL34P49207 117 aaKnown RBP16.01■□□□□ 0.15
UBE3B-201ENST00000340074 DAOAP59103 153 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 C10orf120Q5SQS8 335 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 SCML4Q8N228 414 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 FBXL6Q8N531 539 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 ZNF276Q8N554 614 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 WDTC1Q8N5D0 677 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 FLCNQ8NFG4 579 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 TTC8Q8TAM2 541 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 CLEC4CQ8WTT0 213 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 STK32AQ8WU08 396 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 MIS12Q9H081 205 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 LHX5Q9H2C1 402 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 EBF3Q9H4W6 596 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 DUS2Q9NX74 493 aaKnown RBP16.01■□□□□ 0.15
UBE3B-201ENST00000340074 CFAP97Q9P2B7 532 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 DNMT3LQ9UJW3 386 aa16.01■□□□□ 0.15
UBE3B-201ENST00000340074 WNT6Q9Y6F9 365 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms