RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 PDLIM7Q9NR12 457 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SH3GLB2Q9NR46 395 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 NKIRAS1Q9NYS0 192 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SELENONQ9NZV5 590 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CNTN3Q9P232 1028 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 RASAL2Q9UJF2 1139 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TRIM17Q9Y577 477 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TMX2-CTNND1H3BSU7 103 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 IPO5O00410 1097 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CYP26A1O43174 497 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 DDAH1O94760 285 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TGDSO95455 350 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 ABHD2P08910 425 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CYP2C9P11712 490 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 ERFP50548 548 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 AP2B1P63010 937 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 MRPS9P82933 396 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SPARCL1Q14515 664 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 METTL21CQ5VZV1 264 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 VASH1Q7L8A9 365 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 HEATR3Q7Z4Q2 680 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 GPR142Q7Z601 462 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 AHI1Q8N157 1196 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 PYROXD1Q8WU10 500 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TMIGD2Q96BF3 282 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 COX4I2Q96KJ9 171 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 EIF2AQ9BY44 585 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SSU72Q9NP77 194 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 ATAD3AQ9NVI7 634 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 ANKFY1Q9P2R3 1169 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 POLIQ9UNA4 740 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 DOLKQ9UPQ8 538 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TRAF3IP3Q9Y228 551 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 COQ6Q9Y2Z9 468 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SORBS3O60504 671 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ZBED4O75132 1171 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 GGPS1O95749 300 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ASNSP08243 561 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ETV4P43268 484 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CDK9P50750 372 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 RAB15P59190 212 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 PTK6Q13882 451 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 RASA2Q15283 850 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 TMEM119Q4V9L6 283 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 MARCH8Q5T0T0 291 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ANKS1BQ7Z6G8 1248 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 SULF1Q8IWU6 871 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ANKRD35Q8N283 1001 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 SLC25A41Q8N5S1 370 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 C2orf69Q8N8R5 385 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 GSTCDQ8NEC7 633 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CEP70Q8NHQ1 597 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CHPT1Q8WUD6 406 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 SCFD1Q8WVM8 642 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 HSPH1Q92598 858 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CCDC17Q96LX7 622 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 FAM161BQ96MY7 647 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 PCYT2Q99447 389 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 TTC1Q99614 292 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 TUBB6Q9BUF5 446 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ARMC7Q9H6L4 198 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.82□□□□□ -1.484e-7■■■□□ 19.2
CSDE1-202ENST00000339438 ARMCX1Q9P291 453 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 PADI4Q9UM07 663 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 RABGAP1Q9Y3P9 1069 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 DMXL1Q9Y485 3027 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 FGFR1OPO95684 399 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ALDH1A1P00352 501 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ITIH2P19823 946 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ITGA8P53708 1063 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 PSMD6Q15008 389 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CCL14Q16627 93 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CCDC153Q494R4 210 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CCDC174Q6PII3 467 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ALYREFQ86V81 257 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CCDC25Q86WR0 208 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 SLC13A5Q86YT5 568 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 PIP4K2CQ8TBX8 421 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 USP33Q8TEY7 942 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 DCAF4Q8WV16 495 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 PYDC1Q8WXC3 89 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CTNNBL1Q8WYA6 563 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 NACC2Q96BF6 587 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ZFRQ96KR1 1074 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 DHRS4Q9BTZ2 278 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 TMEM120AQ9BXJ8 343 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 KLC2Q9H0B6 622 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 C12orf65Q9H3J6 166 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 PLGRKTQ9HBL7 147 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ACP6Q9NPH0 428 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 DNAJC17Q9NVM6 304 aaKnown RBP5.82□□□□□ -1.48
CSDE1-202ENST00000339438 DCTN4Q9UJW0 460 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CDH7Q9ULB5 785 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 CLEC11AQ9Y240 323 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 Q9Y3F1 56 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 PTCH2Q9Y6C5 1203 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 AK5Q9Y6K8 562 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 NFASCO94856 1347 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 NDC80O14777 642 aa5.82□□□□□ -1.48
CSDE1-202ENST00000339438 ADCY3O60266 1144 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms