RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SETSIPP0DME0 302 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 GHRP10912 638 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TAC1P20366 129 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SSTR1P30872 391 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SCTRP47872 440 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ATP11AP98196 1134 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SLC6A3Q01959 620 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CBLBQ13191 982 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 MTM1Q13496 603 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 KCNJ11Q14654 390 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 NOTUMQ6P988 496 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SCUBE3Q8IX30 993 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ARRDC4Q8NCT1 418 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PCDH19Q8TAB3 1148 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 STK32AQ8WU08 396 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 FAM172AQ8WUF8 416 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TEKT4Q8WW24 435 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RTP4Q96DX8 246 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SNRNP25Q9BV90 132 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 MAGEB5Q9BZ81 275 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 KDM4CQ9H3R0 1056 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 VPS37BQ9H9H4 285 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PLAC1Q9HBJ0 212 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ABCF3Q9NUQ8 709 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PRKAG3Q9UGI9 489 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 NRCAMQ92823 1304 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 A0A1W2PPM1 405 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 MCF2LO15068 1137 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PRPF4O43172 522 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TYROBPO43914 113 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CYP2C9P11712 490 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CCDC130P13994 396 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 IGFBP6P24592 240 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 LMO2P25791 158 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ATXN1P54253 815 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 MFSD10Q14728 455 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SNX17Q15036 470 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SLC9A4Q6AI14 798 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PCGF5Q86SE9 256 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ANKLE1Q8NAG6 615 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RSAD2Q8WXG1 361 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CENPIQ92674 756 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CCDC77Q9BR77 488 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 MAK16Q9BXY0 300 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 MTMR10Q9NXD2 777 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SLC12A4Q9UP95 1085 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 KAT6AQ92794 2004 aa13.54□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SMIM28A0A1B0GU29 152 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 POC1B-GALNT4F8VUJ3 575 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TREHO43280 583 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PRPSAP2O60256 369 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SPAG7O75391 227 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RASSF9O75901 435 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 KCNA4P22459 653 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TKTP29401 623 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 HOXC8P31273 242 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ARL4CP56559 192 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ROR1Q01973 937 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CCL14Q16627 93 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 C1orf228Q6PIY5 440 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ZC3H18Q86VM9 953 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SESTD1Q86VW0 696 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 UNC93AQ86WB7 457 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CRYBG2Q8N1P7 616 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 FBXO36Q8NEA4 188 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 BEST2Q8NFU1 509 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CD99L2Q8TCZ2 262 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 DCAKDQ8WVC6 231 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 DNAJB3Q8WWF6 145 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 P3H4Q92791 437 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 MAGEB18Q96M61 343 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TRABDQ9H4I3 376 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ACSS3Q9H6R3 686 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ACTR5Q9H9F9 607 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 FETUBQ9UGM5 382 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CENPFP49454 3210 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 FAM47DPA6NHR8 397 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 NDC80O14777 642 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 KCNE1P15382 129 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SLC18A1P54219 525 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 MGAT5Q09328 741 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TLK2Q86UE8 772 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 OSTM1Q86WC4 334 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SMG8Q8ND04 991 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 LRRN4Q8WUT4 740 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SPOCK2Q92563 424 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 APOL6Q9BWW8 343 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 GOLGA2P5Q9HBQ8 144 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 NGRNQ9NPE2 291 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 KLK14Q9P0G3 267 aa13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 XPO7Q9UIA9 1087 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 USP15Q9Y4E8 981 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP1-201ENST00000339269 MDM4O15151 490 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 HNRNPH1P31943 449 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PTPN9P43378 593 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PSEN2P49810 448 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TFDP2Q14188 446 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PDK2Q15119 407 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms