RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 HBS1LQ9Y450 684 aaKnown RBP13.71□□□□□ -0.21
COL2A1-201ENST00000337299 DAGLAQ9Y4D2 1042 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 NFIBO00712 420 aa13.71□□□□□ -0.22
COL2A1-201ENST00000337299 LYPLA1O75608 230 aaPredicted RBP13.71□□□□□ -0.22
COL2A1-201ENST00000337299 ASMTLO95671 621 aa13.71□□□□□ -0.22
COL2A1-201ENST00000337299 INPP5AQ14642 412 aa13.71□□□□□ -0.22
COL2A1-201ENST00000337299 NPY5RQ15761 445 aa13.71□□□□□ -0.22
COL2A1-201ENST00000337299 ZNF720Q7Z2F6 126 aa13.71□□□□□ -0.22
COL2A1-201ENST00000337299 PID1Q7Z2X4 250 aa13.71□□□□□ -0.22
COL2A1-201ENST00000337299 MTMR9Q96QG7 549 aa13.71□□□□□ -0.22
COL2A1-201ENST00000337299 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.22
COL2A1-201ENST00000337299 SCHIP1Q9P0W5 487 aaPredicted RBP13.71□□□□□ -0.22
COL2A1-201ENST00000337299 SEPT3Q9UH03 358 aa13.71□□□□□ -0.22
COL2A1-201ENST00000337299 TMEM59LQ9UK28 342 aa13.71□□□□□ -0.22
COL2A1-201ENST00000337299 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 KAT6AQ92794 2004 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 CFAP99D6REC4 459 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 H0YCG3 227 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 CCNB1P14635 433 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 INPP1P49441 399 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 YWHAHQ04917 246 aaPredicted RBP13.7□□□□□ -0.22
COL2A1-201ENST00000337299 PPP3CAQ08209 521 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 COBLL1Q53SF7 1204 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 FAM182AQ5T1J6 154 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ZBTB8OSQ8IWT0 167 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 DDIASQ8IXT1 998 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 MCOLN2Q8IZK6 566 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 PCDH20Q8N6Y1 951 aaKnown RBP13.7□□□□□ -0.22
COL2A1-201ENST00000337299 CDYLQ9Y232 598 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 TM7SF2O76062 418 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 SERPINB9P50453 376 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 RALGPS1Q5JS13 557 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ZNF618Q5T7W0 954 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 MCF2L2Q86YR7 1114 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 PLD3Q8IV08 490 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 MICU2Q8IYU8 434 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ZNF398Q8TD17 642 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 MARK4Q96L34 752 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 SH3GL1Q99961 368 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 TMEM109Q9BVC6 243 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 NRDE2Q9H7Z3 1164 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 TMEM8AQ9HCN3 771 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 BFARQ9NZS9 450 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 AGO2Q9UKV8 859 aaKnown RBP13.7□□□□□ -0.22
COL2A1-201ENST00000337299 SPAG6O75602 509 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 IMPDH2P12268 514 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 GLRA2P23416 452 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ECHS1P30084 290 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 DCAF12L1Q5VU92 463 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 TRAF7Q6Q0C0 670 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 EEPD1Q7L9B9 569 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 KDELC2Q7Z4H8 507 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 DEFB132Q7Z7B7 95 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 CROCCP3Q8IVE0 287 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 SULF1Q8IWU6 871 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 SP8Q8IXZ3 490 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ZCCHC7Q8N3Z6 543 aaKnown RBP13.7□□□□□ -0.22
COL2A1-201ENST00000337299 C10orf82Q8WW14 230 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 SEMA4DQ92854 862 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ANKRD36BP1Q96IX9 119 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 KCTD10Q9H3F6 313 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 NCANO14594 1321 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 H0Y626 953 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 TRIM16O95361 564 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ALBP02768 609 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 PDGFRAP16234 1089 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ZNF23P17027 643 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 RGS7P49802 495 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 CSE1LP55060 971 aaKnown RBP13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ORC1Q13415 861 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 MTMR1Q13613 665 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 GPR162Q16538 588 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ZNF667Q5HYK9 610 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 OTUD3Q5T2D3 398 aaPredicted RBP13.7□□□□□ -0.22
COL2A1-201ENST00000337299 DCUN1D1Q96GG9 259 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ILKAPQ9H0C8 392 aaPredicted RBP13.7□□□□□ -0.22
COL2A1-201ENST00000337299 PCDH9Q9HC56 1237 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 TUFT1Q9NNX1 390 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 TCF7L2Q9NQB0 619 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 ATAD3AQ9NVI7 634 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 THAP1Q9NVV9 213 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 SUN2Q9UH99 717 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 AJAP1Q9UKB5 411 aaPredicted RBP13.7□□□□□ -0.22
COL2A1-201ENST00000337299 DMTF1Q9Y222 760 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 TRIM17Q9Y577 477 aa13.7□□□□□ -0.22
COL2A1-201ENST00000337299 BOLA2-SMG1P6H3BVE0 249 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 GFAPP14136 432 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 ALOX15P16050 662 aaPredicted RBP13.69□□□□□ -0.22
COL2A1-201ENST00000337299 SDC4P31431 198 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 FDFT1P37268 417 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 SERPINB10P48595 397 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 PIGHQ14442 188 aaPredicted RBP13.69□□□□□ -0.22
COL2A1-201ENST00000337299 RGS21Q2M5E4 152 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 BNIPLQ7Z465 357 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 ATP6V1E2Q96A05 226 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL2A1-201ENST00000337299 SLC39A10Q9ULF5 831 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 AGRPO00253 132 aa13.69□□□□□ -0.22
COL2A1-201ENST00000337299 ANGPT2O15123 496 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms