RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 TMEM161AQ9NX61 479 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 NSMCE4AQ9NXX6 385 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 XPO7Q9UIA9 1087 aaKnown RBP9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 TRAV19A0A0A6YYK7 116 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 ABHD14A-ACY1A0A1B0GW23 586 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 PJA2O43164 708 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 ERBB2P04626 1255 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 USP17L7P0C7H9 530 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 KCNMA1Q12791 1236 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 CASP8Q14790 479 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 CDCA2Q69YH5 1023 aaPredicted RBP9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 SPPL2BQ8TCT7 592 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 SQORQ9Y6N5 450 aa9.68□□□□□ -0.86
FNDC3B-201ENST00000336824 GJA5P36382 358 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 RASSF2P50749 326 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 GHRHRQ02643 423 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 MAP7Q14244 749 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 FBXO46Q6PJ61 603 aaPredicted RBP9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 ILDR2Q71H61 639 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 RASSF3Q86WH2 238 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 ARHGAP24Q8N264 748 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 DDI1Q8WTU0 396 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 BTBD6Q96KE9 485 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 WRAP73Q9P2S5 460 aaPredicted RBP9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 TBK1Q9UHD2 729 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 DLEC1Q9Y238 1755 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 E5RJQ4 531 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 GLUD2P49448 558 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 UGP2Q16851 508 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 NUGGCQ68CJ6 796 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 FAM131BQ86XD5 332 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 ZBED8Q8IZ13 594 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 ACTRT1Q8TDG2 376 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 DNMT3LQ9UJW3 386 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 ATP2C2O75185 946 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 CCT5P48643 541 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 CCDC6Q16204 474 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 EIF2AQ9BY44 585 aaKnown RBP9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 LHX5Q9H2C1 402 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 KLHL14Q9P2G3 628 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 DDX3XO00571 662 aaKnown RBP eCLIP9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 ZNF197O14709 1029 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 COL6A1P12109 1028 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 ATP6V1E2Q96A05 226 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 GOLPH3Q9H4A6 298 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 CNGB3Q9NQW8 809 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 KIAA1217Q5T5P2 1943 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 XPO1O14980 1071 aaKnown RBP9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 CEP120Q8N960 986 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 TRIB2Q92519 343 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 MYLPFQ96A32 169 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 DCUN1D1Q96GG9 259 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 CAPS2Q9BXY5 557 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 DUSP16Q9BY84 665 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 NRXN2Q9P2S2 1712 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 ADAMTS3O15072 1205 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 GLI1P08151 1106 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 REXO1L1PQ8IX06 675 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 CALML6Q8TD86 181 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 ABCB6Q9NP58 842 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 DNAJC17Q9NVM6 304 aaKnown RBP9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 TUBGCP4Q9UGJ1 667 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 ADAM28Q9UKQ2 775 aa9.67□□□□□ -0.86
FNDC3B-201ENST00000336824 RNASEH1O60930 286 aaKnown RBP9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 RHOCP08134 193 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 TLE2Q04725 743 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 ZCWPW2Q504Y3 356 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 HECTD3Q5T447 861 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 TRMT10CQ7L0Y3 403 aaKnown RBP9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 GIPC2Q8TF65 315 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 EDEM1Q92611 657 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 AGAP3Q96P47 875 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 MARCH2Q9P0N8 246 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 FAM50BQ9Y247 325 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 CNMDO75829 334 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 HDAC11Q96DB2 347 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 OSGEPQ9NPF4 335 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 RALBP11234 206 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 COILP38432 576 aaPredicted RBP9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 C2CD6Q53TS8 623 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 ZNF618Q5T7W0 954 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 ATG16L1Q676U5 607 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 TTC23LQ6PF05 361 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 OTOP2Q7RTS6 562 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 PALB2Q86YC2 1186 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 PHF13Q86YI8 300 aaPredicted RBP9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 PPIL6Q8IXY8 311 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 FBXO22Q8NEZ5 403 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 CHORDC1Q9UHD1 332 aaPredicted RBP9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 PLAAQ9Y263 795 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 LUC7L3O95232 432 aaKnown RBP9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 CXCL14O95715 111 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 CST9Q5W186 159 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 DENND1BQ6P3S1 775 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 FAM228AQ86W67 206 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 EMC1Q8N766 993 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 XPO6Q96QU8 1125 aaKnown RBP9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 ARHGAP39Q9C0H5 1083 aa9.66□□□□□ -0.86
FNDC3B-201ENST00000336824 CACYBPQ9HB71 228 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms