RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 Q8N9G6 341 aaPredicted RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 TAS1R2Q8TE23 839 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 RSAD2Q8WXG1 361 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 TMEM79Q9BSE2 394 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 KLHL25Q9H0H3 589 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 SLC38A7Q9NVC3 462 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 ZNF804BA4D1E1 1349 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 C1orf232A0A0U1RR37 186 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 MATN2O00339 956 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 SIN3BO75182 1162 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 UGT1A6P19224 532 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 ITGAXP20702 1163 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 UGT1A1P22309 533 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 UGT1A4P22310 534 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 RPA1P27694 616 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 UGT1A3P35503 534 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 UGT1A5P35504 534 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 RPS6P62753 249 aaKnown RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 PFKPQ01813 784 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 NME3Q13232 169 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 KLF1Q13351 362 aaPredicted RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 ATG16L1Q676U5 607 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 TRIM72Q6ZMU5 477 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 CBWD2Q8IUF1 395 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 ERI1Q8IV48 349 aaKnown RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 FAM71DQ8N9W8 422 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 NT5C1BQ96P26 610 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 PKP2Q99959 881 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 EPB41L1Q9H4G0 881 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 ACSS3Q9H6R3 686 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 SIAEQ9HAT2 523 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 GPRC5CQ9NQ84 441 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 SUN2Q9UH99 717 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 GPC6Q9Y625 555 aaPredicted RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 SCN11AQ9UI33 1791 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 SF3B1O75533 1304 aaKnown RBP eCLIP11.48□□□□□ -0.575e-6■■■■■ 63.2
SEC23B-202ENST00000336714 A0A1W2PQ67 120 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 ARHGEF37A1IGU5 675 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 TESPA1A2RU30 521 aaPredicted RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 MCF2LO15068 1137 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 F7P08709 466 aaPredicted RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 GZMAP12544 262 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 TCEA1P23193 301 aaKnown RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 PCYT1AP49585 367 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 NKX2-5P52952 324 aaPredicted RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 PSMC5P62195 406 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 PPM1LQ5SGD2 360 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 RC3H1Q5TC82 1133 aaKnown RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 CHST15Q7LFX5 561 aaPredicted RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 WDR75Q8IWA0 830 aaKnown RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 ZNF34Q8IZ26 560 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 RTKN2Q8IZC4 609 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 ZNF786Q8N393 782 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 BHLHE22Q8NFJ8 381 aaPredicted RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 ARHGEF1Q92888 912 aaKnown RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 HPS1Q92902 700 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 MARK4Q96L34 752 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 CDRT15Q96T59 188 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 MPHOSPH6Q99547 160 aaKnown RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 P2RX7Q99572 595 aaKnown RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 DNAJB4Q9UDY4 337 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 FAM32AQ9Y421 112 aaKnown RBP11.48□□□□□ -0.57
SEC23B-202ENST00000336714 CAMTA1Q9Y6Y1 1673 aa11.48□□□□□ -0.57
SEC23B-202ENST00000336714 PNMA6FA0A0J9YX94 578 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 TMEM150BA6NC51 233 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 CXorf49A8MYA2 514 aaPredicted RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 IL2RBP14784 551 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 XRCC1P18887 633 aaPredicted RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 CD247P20963 164 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 EPHA3P29320 983 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 MFAP3P55082 362 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 MORF4L2Q15014 288 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 KYAT3Q6YP21 454 aaKnown RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 ZNF720Q7Z2F6 126 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 LILRA2Q8N149 483 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 C12orf43Q96C57 262 aaKnown RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 PLEKHA8Q96JA3 519 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 BTBD9Q96Q07 612 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 HNRNPABQ99729 332 aaKnown RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 NEURL2Q9BR09 285 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 RIOX1Q9H6W3 641 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 EPS15L1Q9UBC2 864 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 FADS3Q9Y5Q0 445 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 ESYT2A0FGR8 921 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 F8VP50 259 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 TGDSO95455 350 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 ZBED1O96006 694 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 SERPINA6P08185 405 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 BTDP43251 543 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 PHKA2P46019 1235 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 SLC18A1P54219 525 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 PPP2R5DQ14738 602 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 NR1D2Q14995 579 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 SF3B3Q15393 1217 aaKnown RBP11.47□□□□□ -0.57
SEC23B-202ENST00000336714 PDPK2PQ6A1A2 396 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 DCDC5Q6ZRR9 648 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 FAM71AQ8IYT1 594 aa11.47□□□□□ -0.57
SEC23B-202ENST00000336714 MCOLN2Q8IZK6 566 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms