RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TSPAN3O60637 253 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 CYP2F1P24903 491 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 TNFSF9P41273 254 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 EFTUD2Q15029 972 aaKnown RBP eCLIP15.55■□□□□ 0.08
C9orf47-201ENST00000334490 MROH9Q5TGP6 573 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 RETSATQ6NUM9 610 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 SH2D3CQ8N5H7 860 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 APOL5Q9BWW9 433 aa15.55■□□□□ 0.08
C9orf47-201ENST00000334490 KLRC4O43908 158 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 CCNE2O96020 404 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.54■□□□□ 0.08
C9orf47-201ENST00000334490 ULBP1Q9BZM6 244 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 ACTR5Q9H9F9 607 aaPredicted RBP15.54■□□□□ 0.08
C9orf47-201ENST00000334490 E5RJQ4 531 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 USP17L7P0C7H9 530 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 SCNN1BP51168 640 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 MRNIPQ6NTE8 343 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 PPP1R36Q96LQ0 422 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 TBCBQ99426 244 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 DNAJC18Q9H819 358 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 SCUBE2Q9NQ36 999 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 DDX3XO00571 662 aaKnown RBP eCLIP15.54■□□□□ 0.08
C9orf47-201ENST00000334490 WNT7AO00755 349 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 MMP3P08254 477 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 SPDYAQ5MJ70 313 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 RBM22Q9NW64 420 aaKnown RBP eCLIP15.54■□□□□ 0.08
C9orf47-201ENST00000334490 UXTQ9UBK9 157 aaPredicted RBP15.54■□□□□ 0.08
C9orf47-201ENST00000334490 ASTN1O14525 1302 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 SF3B1O75533 1304 aaKnown RBP eCLIP15.54■□□□□ 0.08
C9orf47-201ENST00000334490 ANKRD26Q9UPS8 1709 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 RAMP2O60895 175 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 LTFP02788 710 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 STX3Q13277 289 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 SLC29A2Q14542 456 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 UNC93AQ86WB7 457 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 VPS9D1Q9Y2B5 631 aa15.54■□□□□ 0.08
C9orf47-201ENST00000334490 RRP15Q9Y3B9 282 aaKnown RBP15.54■□□□□ 0.08
C9orf47-201ENST00000334490 LTN1O94822 1766 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 FAM237AA0A1B0GTK4 181 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 SUPT3HB4E1H0 165 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 SYNCRIPO60506 623 aaKnown RBP15.53■□□□□ 0.08
C9orf47-201ENST00000334490 SUPT3HO75486 399 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 SLC6A3Q01959 620 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 VAV3Q9UKW4 847 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 LYPLA2O95372 231 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 KRT4P19013 534 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 TUBP50607 506 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 RTP1P59025 263 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 SFSWAPQ12872 951 aaKnown RBP15.53■□□□□ 0.08
C9orf47-201ENST00000334490 MTFR1Q15390 333 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 MARC1Q5VT66 337 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.53■□□□□ 0.08
C9orf47-201ENST00000334490 HEATR9A2RTY3 570 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 ARF4P18085 180 aaPredicted RBP15.53■□□□□ 0.08
C9orf47-201ENST00000334490 OR1E1P30953 314 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 GUCY1A3Q02108 690 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 WDR59Q6PJI9 974 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 NYAP1Q6ZVC0 841 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 FIBCD1Q8N539 461 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 HTATIP2Q9BUP3 242 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 THG1LQ9NWX6 298 aaKnown RBP15.53■□□□□ 0.08
C9orf47-201ENST00000334490 ROBO1Q9Y6N7 1651 aa15.53■□□□□ 0.08
C9orf47-201ENST00000334490 CARNS1A5YM72 827 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 LRRC6Q86X45 466 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 MTMR8Q96EF0 704 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 IL17RAQ96F46 866 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 TRIM15Q9C019 465 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 WWP1Q9H0M0 922 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 HIPK3Q9H422 1215 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 UBP1Q9NZI7 540 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 ADA2Q9NZK5 511 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 MSRAQ9UJ68 235 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 SDR42E2A6NKP2 422 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 ADCY6O43306 1168 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 SLC26A7Q8TE54 656 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 GBP5Q96PP8 586 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 ATP13A1Q9HD20 1204 aa15.52■□□□□ 0.08
C9orf47-201ENST00000334490 A0A0G2JLL6 359 aaPredicted RBP15.52■□□□□ 0.07
C9orf47-201ENST00000334490 TCP11X1B4DZS4 312 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 NCAM2O15394 837 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 ASGR1P07306 291 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 MYL2P10916 166 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 CTNNB1P35222 781 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 TRADDQ15628 312 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 C11orf63Q6NUN7 778 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 LRIG3Q6UXM1 1119 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 PRRT2Q7Z6L0 340 aaPredicted RBP15.52■□□□□ 0.07
C9orf47-201ENST00000334490 MAML3Q96JK9 1138 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 UROC1Q96N76 676 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 POPDC2Q9HBU9 364 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 FAM105AQ9NUU6 356 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 PKD2L2Q9NZM6 624 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 CLCA2Q9UQC9 943 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 DUSP11O75319 330 aaKnown RBP15.52■□□□□ 0.07
C9orf47-201ENST00000334490 ECM1Q16610 540 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 TTLL9Q3SXZ7 439 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 NLRP14Q86W24 1093 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 OR5B17Q8NGF7 314 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 ZNF384Q8TF68 577 aa15.52■□□□□ 0.07
C9orf47-201ENST00000334490 TMA16Q96EY4 203 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms