RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 SSNA1O43805 119 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 PGK2P07205 417 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 EPHB2P29323 1055 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 MAGEA4P43358 317 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 ZAP70P43403 619 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 C5orf22Q49AR2 442 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 CDC73Q6P1J9 531 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 ARHGEF26Q96DR7 871 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 MSTO1Q9BUK6 570 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 TASP1Q9H6P5 420 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 TRIM10Q9UDY6 481 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 CDK12Q9NYV4 1490 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 FRMPD1Q5SYB0 1578 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 CPSF1Q10570 1443 aaKnown RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 ADD1P35611 737 aaKnown RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 VBP1P61758 197 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 MPP3Q13368 585 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 MTF1Q14872 753 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 OCLNQ16625 522 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 LIN52Q52LA3 116 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 C3orf62Q6ZUJ4 267 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 SCN4BQ8IWT1 228 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 LARGE2Q8N3Y3 721 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 DPPA5A6NC42 116 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 PRPF3O43395 683 aaKnown RBP10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 RAG1P15918 1043 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 EPB42P16452 691 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 VAC14Q08AM6 782 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 USF2Q15853 346 aaPredicted RBP10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 ULK2Q8IYT8 1036 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 AASDHPPTQ9NRN7 309 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 PLK2Q9NYY3 685 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 VTI1BQ9UEU0 232 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 PCDHGA4Q9Y5G9 962 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 SLC16A3O15427 465 aaKnown RBP10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 KCNH2Q12809 1159 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 EIF3MQ7L2H7 374 aaKnown RBP10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 AADATQ8N5Z0 425 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 NUDT12Q9BQG2 462 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 ROGDIQ9GZN7 287 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 KIAA1586Q9HCI6 787 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 PCMTD2Q9NV79 361 aa10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 XPO7Q9UIA9 1087 aaKnown RBP10.65□□□□□ -0.71
SPTBN1-201ENST00000333896 NCK2O43639 380 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 HNMTP50135 292 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 SPIRE1Q08AE8 756 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 GTF2H3Q13889 308 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 TSGA10IPQ3SY00 556 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 IQCF2Q8IXL9 164 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 OXNAD1Q96HP4 312 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 PRKAG2Q9UGJ0 569 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 PCSK1NQ9UHG2 260 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 TOPBP1Q92547 1522 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 IFNA7P01567 189 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 HSD3B2P26439 372 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 POU1F1P28069 291 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 CHI3L2Q15782 390 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 CYP51A1Q16850 503 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 THAP1Q9NVV9 213 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 PLCH2O75038 1416 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 F8W810 466 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 TPST1O60507 370 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 STX11O75558 287 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 NPR2P20594 1047 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 SEL1L3Q68CR1 1132 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 RNF19BQ6ZMZ0 732 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 TMC3Q7Z5M5 1100 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 ARID3BQ8IVW6 561 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 RTKN2Q8IZC4 609 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 BTBD9Q96Q07 612 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 NAT9Q9BTE0 207 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 THUMPD3Q9BV44 507 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 AP5M1Q9H0R1 490 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 BFARQ9NZS9 450 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 ARHGEF5Q12774 1597 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 PZPP20742 1482 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 ECDO95905 644 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 CCNE2O96020 404 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 APRTP07741 180 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 HIST1H2AGP0C0S8 130 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 HIST1H2ADP20671 130 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 EIF3EP60228 445 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 HIST1H2AHQ96KK5 128 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 HIST1H2AJQ99878 128 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 TSEN34Q9BSV6 310 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 H2AFJQ9BTM1 129 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 TMEM120AQ9BXJ8 343 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 A0A1W2PP64 1363 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 PSMD3O43242 534 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 KRT34O76011 436 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 PTPN1P18031 435 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 RFX3P48380 749 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 POU5F1Q01860 360 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 ZNF844Q08AG5 666 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 ZNF699Q32M78 642 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 LLGL2Q6P1M3 1020 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 C1orf54Q8WWF1 131 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 COMMD8Q9NX08 183 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 PDE8AO60658 829 aa10.64□□□□□ -0.71
SPTBN1-201ENST00000333896 HERC3Q15034 1050 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms