RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 TRMT5Q32P41 509 aaKnown RBP9.07□□□□□ -0.96
LIMK2-201ENST00000331728 LRRC23Q53EV4 343 aaPredicted RBP9.07□□□□□ -0.96
LIMK2-201ENST00000331728 IZUMO2Q6UXV1 221 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 NAT8LQ8N9F0 302 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 DCAKDQ8WVC6 231 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 SLC44A1Q8WWI5 657 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 CENPKQ9BS16 269 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 IFT122Q9HBG6 1241 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 DMAP1Q9NPF5 467 aaPredicted RBP9.07□□□□□ -0.96
LIMK2-201ENST00000331728 IRAK4Q9NWZ3 460 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 POLIQ9UNA4 740 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 F5H423 210 aaPredicted RBP9.07□□□□□ -0.96
LIMK2-201ENST00000331728 ADCY3O60266 1144 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 TGDSO95455 350 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 LYNP07948 512 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 CD48P09326 243 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 RARBP10826 455 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 NCF2P19878 526 aaPredicted RBP9.07□□□□□ -0.96
LIMK2-201ENST00000331728 GPD1P21695 349 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 LRRC36Q1X8D7 754 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 CHSY1Q86X52 802 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 SLC26A7Q8TE54 656 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 PRPF31Q8WWY3 499 aaKnown RBP9.07□□□□□ -0.96
LIMK2-201ENST00000331728 PTPRN2Q92932 1015 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 PRR11Q96HE9 360 aaPredicted RBP9.07□□□□□ -0.96
LIMK2-201ENST00000331728 SERAC1Q96JX3 654 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 MECRQ9BV79 373 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 FRMD8Q9BZ67 464 aaPredicted RBP9.07□□□□□ -0.96
LIMK2-201ENST00000331728 ZCWPW1Q9H0M4 648 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 ASCC2Q9H1I8 757 aaPredicted RBP9.07□□□□□ -0.96
LIMK2-201ENST00000331728 KRT82Q9NSB4 513 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 KCNK4Q9NYG8 393 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 EFR3BQ9Y2G0 817 aa9.07□□□□□ -0.96
LIMK2-201ENST00000331728 STK10O94804 968 aaKnown RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 AMPD1P23109 780 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 SDCCAG8Q86SQ7 713 aaPredicted RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 RASSF3Q86WH2 238 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 LRRC71Q8N4P6 559 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 SLC25A41Q8N5S1 370 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 UBA3Q8TBC4 463 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 TFAP2BQ92481 460 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 EZH1Q92800 747 aaPredicted RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 DDX50Q9BQ39 737 aaKnown RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 GPATCH2LQ9NWQ4 482 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 RIPK3Q9Y572 518 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 F8W8V4 182 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 AVILO75366 819 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 ANPEPP15144 967 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 SDC4P31431 198 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 PTPN7P35236 360 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 CDH8P55286 799 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 ZNF252P-AS1Q0IIN9 211 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 PRKG1Q13976 671 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 GRAMD1BQ3KR37 738 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 ZC3H12AQ5D1E8 599 aaKnown RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 ABHD15Q6UXT9 468 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 ZPBP2Q6X784 338 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 CDKL3Q8IVW4 592 aaPredicted RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 KBTBD2Q8IY47 623 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 DRAXINQ8NBI3 349 aaPredicted RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 TSNARE1Q96NA8 513 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 WRNIP1Q96S55 665 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 MPHOSPH6Q99547 160 aaKnown RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 CCDC28BQ9BUN5 200 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 C2orf40Q9H1Z8 148 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 HESX1Q9UBX0 185 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 GJA3Q9Y6H8 435 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 MAGEC1O60732 1142 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 FAM155BO75949 473 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 RGS7P49802 495 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 SERPINB9P50453 376 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 NEK3P51956 506 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 RAP1GDS1P52306 607 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 NRLP54845 237 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 MMRN1Q13201 1228 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 CAPSQ13938 189 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 NET1Q7Z628 596 aaPredicted RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 FAM167AQ96KS9 214 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 OLFM3Q96PB7 478 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 EPAS1Q99814 870 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 PHACTR1Q9C0D0 580 aa9.06□□□□□ -0.96
LIMK2-201ENST00000331728 PPP1R1BQ9UD71 204 aaPredicted RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.06□□□□□ -0.96
LIMK2-201ENST00000331728 NFASCO94856 1347 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 MEI4A8MW99 385 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 WNT10BO00744 389 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 CREB3O43889 395 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 IL1R2P27930 398 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 SNX16P57768 344 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 PTPN11Q06124 597 aaPredicted RBP9.05□□□□□ -0.96
LIMK2-201ENST00000331728 TBCCQ15814 346 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 CCDC142Q17RM4 750 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 RIPOR1Q6ZS17 1223 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 ZCCHC23Q6ZST2 131 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.05□□□□□ -0.96
LIMK2-201ENST00000331728 RXFP2Q8WXD0 754 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 PPP1R16BQ96T49 567 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 ECSITQ9BQ95 431 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 CNPY3Q9BT09 278 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms