RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 GNEQ9Y223 722 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 MBLAC1A4D2B0 266 aaPredicted RBP15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 UNCXA6NJT0 531 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 TAC1P20366 129 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 HNRNPH1P31943 449 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 HDAC4P56524 1084 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 BOLA3Q53S33 107 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 FAM133BQ5BKY9 247 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 CGB2Q6NT52 195 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 TLK2Q86UE8 772 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 MAP7D3Q8IWC1 876 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 PCDH19Q8TAB3 1148 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 KBTBD7Q8WVZ9 684 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 SGSM3Q96HU1 749 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 SMC6Q96SB8 1091 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 MAGEB5Q9BZ81 275 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 SLC24A2Q9UI40 661 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 SMIM28A0A1B0GU29 152 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 SMIM35A0A1B0GVV1 85 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 TREHO43280 583 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 ASMTLO95671 621 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 GHRP10912 638 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 STIP1P31948 543 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 RPA3P35244 121 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 IL9RQ01113 521 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 RNASELQ05823 741 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 MFSD10Q14728 455 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 FBXO47Q5MNV8 452 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 FAM47EQ6ZV65 393 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 SPATA21Q7Z572 469 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 PALM2Q8IXS6 379 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 DENND1AQ8TEH3 1009 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 SPOCK2Q92563 424 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 USP29Q9HBJ7 922 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 SLC40A1Q9NP59 571 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 HAUS2Q9NVX0 235 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 SLC5A4Q9NY91 659 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 GRID1Q9ULK0 1009 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 CEP350Q5VT06 3117 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 SLC15A5A6NIM6 579 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 KCNN4O15554 427 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 AVILO75366 819 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 SETSIPP0DME0 302 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 LCP1P13796 627 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 PHBP35232 272 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 BCAR1P56945 870 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 SNX17Q15036 470 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 PDK2Q15119 407 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 PAFAH2Q99487 392 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 PHACTR1Q9C0D0 580 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 ACSS3Q9H6R3 686 aa15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 UBQLN1Q9UMX0 589 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-201ENST00000331433 APOL1O14791 398 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 PRPF4O43172 522 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 SUN1O94901 812 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 CA4P22748 312 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 RBL1P28749 1068 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 ELK3P41970 407 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 SOX4Q06945 474 aaPredicted RBP15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 FAXCQ5TGI0 409 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 UNC93AQ86WB7 457 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 CCDC33Q8N5R6 958 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 FAF2Q96CS3 445 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 RAB6BQ9NRW1 208 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 KPNA7A9QM74 516 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 PIRO00625 290 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 CELF2O95319 508 aaKnown RBP15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 KRT4P19013 534 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 GNL1P36915 607 aaPredicted RBP15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 BEX3Q00994 111 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 KCNJ11Q14654 390 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 ARHGAP17Q68EM7 881 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 TEKT4Q8WW24 435 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 SLC12A4Q9UP95 1085 aa15.48■□□□□ 0.07
CLCNKA-201ENST00000331433 HGSO14964 777 aaPredicted RBP15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 RASSF9O75901 435 aa15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 CDC42EP1Q00587 391 aa15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 BST2Q10589 180 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 DNAJC3Q13217 504 aa15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 SLC1A5Q15758 541 aa15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 GPR162Q16538 588 aa15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 CCL14Q16627 93 aa15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 SLC9A4Q6AI14 798 aa15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 SLC2A14Q8TDB8 520 aa15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 TBCBQ99426 244 aa15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 SENP1Q9P0U3 644 aa15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 SMG5Q9UPR3 1016 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 PDCD11Q14690 1871 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-201ENST00000331433 MDM4O15151 490 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 TYROBPO43914 113 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 UBOX5O94941 541 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 ZBED1O96006 694 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 PSEN2P49810 448 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 ADAM17P78536 824 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 MTFR1Q15390 333 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 AGGF1Q8N302 714 aaeCLIP15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 ANKRD52Q8NB46 1076 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 STK32AQ8WU08 396 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 THOC1Q96FV9 657 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms