RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 CC2D2BQ6DHV5 1058 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 CIAPIN1Q6FI81 312 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 SDE2Q6IQ49 451 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 B3GNT9Q6UX72 402 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 ENOSF1Q7L5Y1 443 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 MICALL2Q8IY33 904 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 NDUFAF2Q8N183 169 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 JOSD2Q8TAC2 188 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 SPATA18Q8TC71 538 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 GDPD5Q8WTR4 605 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 ALKBH8Q96BT7 664 aaKnown RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 PPP1R36Q96LQ0 422 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 TCHPQ9BT92 498 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 FAM192AQ9GZU8 254 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 PIH1D1Q9NWS0 290 aaKnown RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 COL14A1Q05707 1796 aaKnown RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 DNAJC6O75061 913 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 PROCP04070 461 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 ACO1P21399 889 aaKnown RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 GRIA2P42262 883 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 ACTR3P61158 418 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 USP46P62068 366 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 CDO1Q16878 200 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 NET1Q7Z628 596 aaPredicted RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 ZNF677Q86XU0 584 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 PIP4K2CQ8TBX8 421 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 PPP2R3CQ969Q6 453 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 NR1H4Q96RI1 486 aaPredicted RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 WWP1Q9H0M0 922 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 AGO2Q9UKV8 859 aaKnown RBP8.2□□□□□ -1.1
VMA21-201ENST00000330374 HEY1Q9Y5J3 304 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 AK5Q9Y6K8 562 aa8.2□□□□□ -1.1
VMA21-201ENST00000330374 ZNF541Q9H0D2 1346 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 PFDN1O60925 122 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 GMPRP36959 345 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 SWSAP1Q6NVH7 229 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 RSBN1LQ6PCB5 846 aaPredicted RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 SP8Q8IXZ3 490 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 ZNF668Q96K58 619 aaPredicted RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 MMADHCQ9H3L0 296 aaPredicted RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 SLC17A6Q9P2U8 582 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 ADAMTS6Q9UKP5 1117 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 DRG1Q9Y295 367 aaKnown RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 PLSCR1O15162 318 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 MAPTP10636 758 aaKnown RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 RPL10AP62906 217 aaKnown RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 GSTA3Q16772 222 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 PPP6R3Q5H9R7 873 aaPredicted RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 VWA5B1Q5TIE3 1220 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 PCGF5Q86SE9 256 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 MYLK4Q86YV6 388 aaPredicted RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 TMEM130Q8N3G9 435 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 TTLL6Q8N841 843 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 SLC35B2Q8TB61 432 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 TARS2Q9BW92 718 aaKnown RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 POLR3FQ9H1D9 316 aaPredicted RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 GALNT8Q9NY28 637 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 NXF1Q9UBU9 619 aaKnown RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 H0YIN7 160 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 MCF2LO15068 1137 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 HOXA2O43364 376 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 ZNF862O60290 1169 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 RAD17O75943 681 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 APRTP07741 180 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 MMP8P22894 467 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 RAP1GDS1P52306 607 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 OSTNP61366 133 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 DPYSL3Q14195 570 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 ZACNQ401N2 412 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 BSPRYQ5W0U4 402 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 PHF13Q86YI8 300 aaPredicted RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 NAT14Q8WUY8 206 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 NKD2Q969F2 451 aaPredicted RBP8.19□□□□□ -1.1
VMA21-201ENST00000330374 ANAPC16Q96DE5 110 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 IMPG2Q9BZV3 1241 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 IFT122Q9HBG6 1241 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 PCDHGB7Q9Y5F8 929 aa8.19□□□□□ -1.1
VMA21-201ENST00000330374 A0A0B4J269 797 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 CAPN8A6NHC0 703 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 MAGEC1O60732 1142 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 TRPA1O75762 1119 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 CST3P01034 146 aaPredicted RBP8.18□□□□□ -1.1
VMA21-201ENST00000330374 VAV1P15498 845 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 HSPA1LP34931 641 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 FOXK1P85037 733 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 EFHC1Q5JVL4 640 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 PAOXQ6QHF9 649 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 DHDDSQ86SQ9 333 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 HPS6Q86YV9 775 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 SNRNP27Q8WVK2 155 aaKnown RBP8.18□□□□□ -1.1
VMA21-201ENST00000330374 SLC44A1Q8WWI5 657 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 MASTLQ96GX5 879 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 ACSS2Q9NR19 701 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 ZC3H7BQ9UGR2 993 aaKnown RBP8.18□□□□□ -1.1
VMA21-201ENST00000330374 APPL1Q9UKG1 709 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 CTDP1Q9Y5B0 961 aaPredicted RBP8.18□□□□□ -1.1
VMA21-201ENST00000330374 GRAP2O75791 330 aa8.18□□□□□ -1.1
VMA21-201ENST00000330374 F7P08709 466 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms