RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 SPATA18Q8TC71 538 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 URGCPQ8TCY9 931 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 KCNK16Q96T55 309 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 SMOQ99835 787 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 EPN3Q9H201 632 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 ZDHHC18Q9NUE0 388 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 TMEM30AQ9NV96 361 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 GOLGA6L10A6NI86 522 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 PRPSAP2O60256 369 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 AP1G2O75843 785 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 CPP00450 1065 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 MYZAPP0CAP1 466 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 CACNA2D1P54289 1103 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 KRT17Q04695 432 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 MTMR3Q13615 1198 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 PPP1R7Q15435 360 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 SCYL2Q6P3W7 929 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 COLGALT2Q8IYK4 626 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 ADAM33Q9BZ11 813 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 GRHL1Q9NZI5 618 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 KANSL3Q9P2N6 904 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 DSEQ9UL01 958 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 EFR3BQ9Y2G0 817 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 NDUFAB1O14561 156 aa21.18■□□□□ 0.98
RIPPLY3-201ENST00000329553 MDH1P40925 334 aaKnown RBP21.18■□□□□ 0.98
RIPPLY3-201ENST00000329553 ZNF844Q08AG5 666 aa21.18■□□□□ 0.98
RIPPLY3-201ENST00000329553 FAM171BQ6P995 826 aa21.18■□□□□ 0.98
RIPPLY3-201ENST00000329553 ZMIZ2Q8NF64 920 aa21.18■□□□□ 0.98
RIPPLY3-201ENST00000329553 C11orf84Q9BUA3 381 aaPredicted RBP21.18■□□□□ 0.98
RIPPLY3-201ENST00000329553 LRRC4Q9HBW1 653 aa21.18■□□□□ 0.98
RIPPLY3-201ENST00000329553 WBP1LQ9NX94 342 aa21.18■□□□□ 0.98
RIPPLY3-201ENST00000329553 TSC2P49815 1807 aa21.18■□□□□ 0.98
RIPPLY3-201ENST00000329553 SRRM3A6NNA2 597 aaPredicted RBP21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 COL6A1P12109 1028 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 PTPN9P43378 593 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 MNX1P50219 401 aaPredicted RBP21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 HDAC4P56524 1084 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 INTS6LQ5JSJ4 861 aaKnown RBP21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 EFHC1Q5JVL4 640 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 OVOS1Q6IE37 1185 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 ZDHHC24Q6UX98 284 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 TMC3Q7Z5M5 1100 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 TADA2BQ86TJ2 420 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 OR10T2Q8NGX3 314 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 GRK7Q8WTQ7 553 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 SEPT8Q92599 483 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 SCLYQ96I15 445 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 CCDC114Q96M63 670 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 TMEM209Q96SK2 561 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 DDX23Q9BUQ8 820 aaKnown RBP21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 DNAJB4Q9UDY4 337 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 ATXN2Q99700 1313 aaKnown RBP21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 LIASO43766 372 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 OR1G1P47890 313 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 PLTPP55058 493 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 MRPS5P82675 430 aaKnown RBP21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 RNASELQ05823 741 aaKnown RBP21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 SLC39A5Q6ZMH5 540 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 LRRTM3Q86VH5 581 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 OR2W6PQ8NHA6 318 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 CENPIQ92674 756 aaPredicted RBP21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 MYLPFQ96A32 169 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 RHOBTB2Q9BYZ6 727 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 ELAC1Q9H777 363 aaKnown RBP21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 TMLHEQ9NVH6 421 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 DNPEPQ9ULA0 475 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 PCDHB7Q9Y5E2 793 aa21.17■□□□□ 0.98
RIPPLY3-201ENST00000329553 CST8O60676 142 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 ENDOD1O94919 500 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 ARSEP51690 589 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 TKTL1P51854 596 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 B4GALNT4Q76KP1 1039 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 FBXO25Q8TCJ0 367 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 HAUS1Q96CS2 278 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 PKMYT1Q99640 499 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 NEU2Q9Y3R4 380 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 TYMPP19971 482 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 ATXN1P54253 815 aaKnown RBP21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 CDH6P55285 790 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 DYNLT1P63172 113 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 TRIP13Q15645 432 aaPredicted RBP21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 BOLA3Q53S33 107 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 DEFB106AQ8N104 65 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 SIX6OS1Q8N1H7 587 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 ARFGAP2Q8N6H7 521 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 FAM149B1Q96BN6 582 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 CALN1Q9BXU9 219 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 SAE1Q9UBE0 346 aaPredicted RBP21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 PCDHB8Q9UN66 801 aa21.16■□□□□ 0.98
RIPPLY3-201ENST00000329553 SCN5AQ14524 2016 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 GAS8O95995 478 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 GATMP50440 423 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 CCL23P55773 120 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 MMRN1Q13201 1228 aa21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 BYSLQ13895 437 aaKnown RBP21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 DRICH1Q6PGQ1 229 aaPredicted RBP21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 SYDE1Q6ZW31 735 aaPredicted RBP21.15■□□□□ 0.98
RIPPLY3-201ENST00000329553 GPRIN1Q7Z2K8 1008 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms