RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 WASHC2DQ5SRD0 308 aa18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 ATF7IP2Q5U623 682 aa18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 ANGEL2Q5VTE6 544 aaKnown RBP18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 SH2D5Q6ZV89 423 aa18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 CYP4V2Q6ZWL3 525 aaPredicted RBP18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 NETO2Q8NC67 525 aa18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 CMASQ8NFW8 434 aaPredicted RBP18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 CCDC110Q8TBZ0 833 aa18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 NSL1Q96IY1 281 aa18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 AS3MTQ9HBK9 375 aa18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 PIH1D1Q9NWS0 290 aaKnown RBP18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 SLC17A6Q9P2U8 582 aa18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 WASF2Q9Y6W5 498 aa18.08■□□□□ 0.49
PTP4A3-201ENST00000329397 COPEO14579 308 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 CAPN9O14815 690 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 DHRS4L1P0CG22 281 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 ESRRAP11474 423 aaPredicted RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 AMPD1P23109 780 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 RFC5P40937 340 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 KCNJ11Q14654 390 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 HSF5Q4G112 596 aaPredicted RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 TREML2Q5T2D2 321 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 TRMT10BQ6PF06 316 aaKnown RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 TREML1Q86YW5 311 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 ARID3BQ8IVW6 561 aaPredicted RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 SHKBP1Q8TBC3 707 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 RXFP2Q8WXD0 754 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 HEXIM2Q96MH2 286 aaKnown RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 IQCGQ9H095 443 aaKnown RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 TLE6Q9H808 572 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 PLAC1Q9HBJ0 212 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 NGRNQ9NPE2 291 aaKnown RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 SAR1AQ9NR31 198 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 STK32BQ9NY57 414 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 ZFATQ9P243 1243 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 DNAH12Q6ZR08 3092 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 H3BRJ5 948 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 TBX10O75333 385 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 HMGCRP04035 888 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 OAZ1P54368 228 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 IGBP1P78318 339 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 TAZQ16635 292 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 CA9Q16790 459 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 MAP1SQ66K74 1059 aaPredicted RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 OR6B2Q6IFH4 312 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 ZBTB8OSQ8IWT0 167 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 OXNAD1Q96HP4 312 aaPredicted RBP18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 PPCSQ9HAB8 311 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 TTLL3Q9Y4R7 772 aa18.08■□□□□ 0.48
PTP4A3-201ENST00000329397 SOWAHBA6NEL2 793 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 PGK2P07205 417 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 PDGFRAP16234 1089 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 ATP6V1C1P21283 382 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 KDSRQ06136 332 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 BST1Q10588 318 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 NOMO1Q15155 1222 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 SNX30Q5VWJ9 437 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 NCAPG2Q86XI2 1143 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 UNC5BQ8IZJ1 945 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 MPP5Q8N3R9 675 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 COPS5Q92905 334 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 SYT15Q9BQS2 421 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 C20orf27Q9GZN8 174 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 CDT1Q9H211 546 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 DCLRE1BQ9H816 532 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 ARHGEF4Q9NR80 690 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 PCMTD2Q9NV79 361 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 MCM3APO60318 1980 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 ZBTB42B2RXF5 422 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 GPR25O00155 361 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 CYP3A5P20815 502 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 GRIA1P42261 906 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 AP3M2P53677 418 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 MRPS5P82675 430 aaKnown RBP18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 TMPRSS15P98073 1019 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 PPP6R3Q5H9R7 873 aaPredicted RBP18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 MROH9Q5TGP6 573 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 JADE1Q6IE81 842 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 MPZL3Q6UWV2 235 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 RNF19AQ9NV58 838 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 BTBD7Q9P203 1132 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 FETUBQ9UGM5 382 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 ZC3H7BQ9UGR2 993 aaKnown RBP18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 MAD1L1Q9Y6D9 718 aa18.07■□□□□ 0.48
PTP4A3-201ENST00000329397 NVLO15381 856 aaKnown RBP18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 CSH1P0DML2 217 aa18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 CSH2P0DML3 217 aa18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 EFNA5P52803 228 aa18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 THOC5Q13769 683 aaKnown RBP18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 FAM183BPQ6ZVS7 135 aa18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 ALKBH8Q96BT7 664 aaKnown RBP18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 USP29Q9HBJ7 922 aa18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 CNTN3Q9P232 1028 aa18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 PPARGC1AQ9UBK2 798 aaKnown RBP18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 EFR3BQ9Y2G0 817 aa18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 EME2A4GXA9 379 aaPredicted RBP18.06■□□□□ 0.48
PTP4A3-201ENST00000329397 LACTBL1A8MY62 500 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms