RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 ZNF302Q9NR11 478 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 ASNSD1Q9NWL6 643 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 TJP2Q9UDY2 1190 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 THSD7AQ9UPZ6 1657 aa15.19■□□□□ 0.02
SSBP3-201ENST00000326956 CYB561D2O14569 222 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 KCNN4O15554 427 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 OPHN1O60890 802 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 TOM1L1O75674 476 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 SUPT20HL2P0C7V6 817 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 GSTT1P30711 240 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 IRX4P78413 519 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 SUPT20HL1Q3ZLR7 823 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 SH2D5Q6ZV89 423 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 MYLK4Q86YV6 388 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-201ENST00000326956 KLC2Q9H0B6 622 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 SMYD3Q9H7B4 428 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 PRR5-ARHGAP8B1AHC4 643 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 USP1O94782 785 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 APRTP07741 180 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 KRT19P08727 400 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 INHBEP58166 350 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 ARHGAP8P85298 464 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 KRT81Q14533 505 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 KCNJ11Q14654 390 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 TAF5Q15542 800 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 FAXCQ5TGI0 409 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 SESTD1Q86VW0 696 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 KIAA0319LQ8IZA0 1049 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 APBB2Q92870 758 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 ZNF395Q9H8N7 513 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-201ENST00000326956 GPAMQ9HCL2 828 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 DNAJB4Q9UDY4 337 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 ZNF180Q9UJW8 692 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 SOX13Q9UN79 622 aa15.18■□□□□ 0.02
SSBP3-201ENST00000326956 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 TRDMT1O14717 391 aaKnown RBP15.17■□□□□ 0.02
SSBP3-201ENST00000326956 ZBED1O96006 694 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 TNNC2P02585 160 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 OATP04181 439 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 ATP5BP06576 529 aaKnown RBP15.17■□□□□ 0.02
SSBP3-201ENST00000326956 MMRN1Q13201 1228 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 NOMO1Q15155 1222 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 FAM47CQ5HY64 1035 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 MROH9Q5TGP6 573 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 FOXB2Q5VYV0 432 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 FAM83AQ86UY5 434 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 CMASQ8NFW8 434 aaPredicted RBP15.17■□□□□ 0.02
SSBP3-201ENST00000326956 ATG4CQ96DT6 458 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 PNPLA8Q9NP80 782 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.17■□□□□ 0.02
SSBP3-201ENST00000326956 DDX43Q9NXZ2 648 aaKnown RBP15.17■□□□□ 0.02
SSBP3-201ENST00000326956 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.17■□□□□ 0.02
SSBP3-201ENST00000326956 TRUB2O95900 331 aaKnown RBP15.17■□□□□ 0.02
SSBP3-201ENST00000326956 SERPINA6P08185 405 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 YWHAZP63104 245 aaKnown RBP15.17■□□□□ 0.02
SSBP3-201ENST00000326956 SURF1Q15526 300 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 LRRC36Q1X8D7 754 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 FKBP1CQ5VVH2 108 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 MAP7D3Q8IWC1 876 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 ADPGKQ9BRR6 497 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 HBS1LQ9Y450 684 aaKnown RBP15.17■□□□□ 0.02
SSBP3-201ENST00000326956 TTLL3Q9Y4R7 772 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 HEY1Q9Y5J3 304 aa15.17■□□□□ 0.02
SSBP3-201ENST00000326956 MEI4A8MW99 385 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 CXorf49A8MYA2 514 aaPredicted RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 ASPHQ12797 758 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 CDC16Q13042 620 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 UBAP2LQ14157 1087 aaKnown RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 PDCD2Q16342 344 aaPredicted RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 TAZQ16635 292 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 FAM102AQ5T9C2 384 aaPredicted RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 SNRNP48Q6IEG0 339 aaKnown RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 DPH6Q7L8W6 267 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 OLFM3Q96PB7 478 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 TUBGCP5Q96RT8 1024 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 GORASP1Q9BQQ3 440 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 APOL6Q9BWW8 343 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 DHX33Q9H6R0 707 aaKnown RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 IL1RAPL1Q9NZN1 696 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 SIRPGQ9P1W8 387 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 PPM1HQ9ULR3 514 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 APOBEC2Q9Y235 224 aaKnown RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 PPME1Q9Y570 386 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 RIPK3Q9Y572 518 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 ANKRD33BA6NCL7 494 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 PRPSAP2O60256 369 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 APOEP02649 317 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 RPS6KA3P51812 740 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 EPHB1P54762 984 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 MTMR2Q13614 643 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 EFHC1Q5JVL4 640 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 FAM182AQ5T1J6 154 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 ZCCHC23Q6ZST2 131 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 SLC26A7Q8TE54 656 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 ANKRD36BP1Q96IX9 119 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 CPXM1Q96SM3 734 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 CCDC28BQ9BUN5 200 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 MRPL4Q9BYD3 311 aaKnown RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 LHX5Q9H2C1 402 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 TMEM134Q9H6X4 195 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms