RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CSNK1G1Q9HCP0 422 aa19.26■□□□□ 0.67
USP39-201ENST00000323701 DSEQ9UL01 958 aa19.26■□□□□ 0.67
USP39-201ENST00000323701 TMEM189-UBE2V1I3L0A0 370 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 PRPSAP2O60256 369 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 ENDOD1O94919 500 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 TJP3O95049 919 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 ECEL1O95672 775 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 USP17L7P0C7H9 530 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 IL4RP24394 825 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 SCNN1AP37088 669 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 BHLHA9Q7RTU4 235 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 MAIP1Q8WWC4 291 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 SLCO2A1Q92959 643 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 TOX2Q96NM4 488 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 CALN1Q9BXU9 219 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 RAB17Q9H0T7 212 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 MARCH5Q9NX47 278 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 NEU2Q9Y3R4 380 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 PTPRDP23468 1912 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 LIASO43766 372 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 CST8O60676 142 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 MATKP42679 507 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 SLC11A1P49279 550 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 CDH6P55285 790 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 YWHAZP63104 245 aaKnown RBP19.25■□□□□ 0.67
USP39-201ENST00000323701 DCAF6Q58WW2 860 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 FAM182AQ5T1J6 154 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 ARCQ7LC44 396 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 SIX6OS1Q8N1H7 587 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 CCDC185Q8N715 623 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 APBB2Q92870 758 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 SNRNP25Q9BV90 132 aaKnown RBP19.25■□□□□ 0.67
USP39-201ENST00000323701 TMPRSS4Q9NRS4 437 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.25■□□□□ 0.67
USP39-201ENST00000323701 LRFN2Q9ULH4 789 aa19.25■□□□□ 0.67
USP39-201ENST00000323701 HSF2BPO75031 334 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 UPP2O95045 317 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 IVDP26440 423 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 DAOAP59103 153 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 GABPB1Q06547 395 aaPredicted RBP19.24■□□□□ 0.67
USP39-201ENST00000323701 DPYSL3Q14195 570 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 LRRC26Q2I0M4 334 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 EFHC1Q5JVL4 640 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 TMCO2Q7Z6W1 182 aaPredicted RBP19.24■□□□□ 0.67
USP39-201ENST00000323701 STKLD1Q8NE28 680 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 SPATA18Q8TC71 538 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 FBXO25Q8TCJ0 367 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 BCL7CQ8WUZ0 217 aaPredicted RBP19.24■□□□□ 0.67
USP39-201ENST00000323701 PAWRQ96IZ0 340 aaKnown RBP19.24■□□□□ 0.67
USP39-201ENST00000323701 NAALADL1Q9UQQ1 740 aa19.24■□□□□ 0.67
USP39-201ENST00000323701 TBKBP1A7MCY6 615 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 AGPSO00116 658 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 TADA2AO75478 443 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 PECAM1P16284 738 aaPredicted RBP19.23■□□□□ 0.67
USP39-201ENST00000323701 CYP2F1P24903 491 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 CETN2P41208 172 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 PLTPP55058 493 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 PPP1R7Q15435 360 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 FBXO46Q6PJ61 603 aaPredicted RBP19.23■□□□□ 0.67
USP39-201ENST00000323701 SCAMP5Q8TAC9 235 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 RIN2Q8WYP3 895 aaPredicted RBP19.23■□□□□ 0.67
USP39-201ENST00000323701 CCDC114Q96M63 670 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 FAM114A2Q9NRY5 505 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 MICAL3Q7RTP6 2002 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 OAZ2O95190 189 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 HSPA8P11142 646 aaKnown RBP19.23■□□□□ 0.67
USP39-201ENST00000323701 VPS41P49754 854 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 SLC39A12Q504Y0 691 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 C1orf53Q5VUE5 145 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 CEP57Q86XR8 500 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 NPAS4Q8IUM7 802 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 THEM5Q8N1Q8 247 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 EIF1ADQ8N9N8 165 aaKnown RBP19.23■□□□□ 0.67
USP39-201ENST00000323701 ATL2Q8NHH9 583 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 PIK3R5Q8WYR1 880 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 NT5C3BQ969T7 300 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 RASAL2Q9UJF2 1139 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 ADAM28Q9UKQ2 775 aa19.23■□□□□ 0.67
USP39-201ENST00000323701 FNDC1Q4ZHG4 1894 aaPredicted RBP19.23■□□□□ 0.67
USP39-201ENST00000323701 LAMA3Q16787 3333 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 SYNJ2BP-COX16A0A087WUM0 186 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 AMHP03971 560 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 ETS1P14921 441 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 DRG2P55039 364 aaKnown RBP19.22■□□□□ 0.67
USP39-201ENST00000323701 OTUD4Q01804 1114 aaKnown RBP19.22■□□□□ 0.67
USP39-201ENST00000323701 BYSLQ13895 437 aaKnown RBP19.22■□□□□ 0.67
USP39-201ENST00000323701 OASLQ15646 514 aaKnown RBP19.22■□□□□ 0.67
USP39-201ENST00000323701 VARS2Q5ST30 1063 aaKnown RBP19.22■□□□□ 0.67
USP39-201ENST00000323701 FAM171A1Q5VUB5 890 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 NPNTQ6UXI9 565 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 BBS12Q6ZW61 710 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 B4GALNT4Q76KP1 1039 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 FAM131BQ86XD5 332 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 ADAM32Q8TC27 787 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 ACTL9Q8TC94 416 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 SLC2A13Q96QE2 648 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 TMEM39AQ9NV64 488 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 COX16Q9P0S2 106 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 DAB1O75553 588 aa19.22■□□□□ 0.67
USP39-201ENST00000323701 ZSCAN5DPP0CG00 497 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms