RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 NELFCDQ8IXH7 590 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 SCAMP5Q8TAC9 235 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 FBXO32Q969P5 355 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 IPO9Q96P70 1041 aaKnown RBP15.09■□□□□ 0.01
RPP40-201ENST00000319533 NXF1Q9UBU9 619 aaKnown RBP15.09■□□□□ 0.01
RPP40-201ENST00000319533 MBD1Q9UIS9 605 aaPredicted RBP15.09■□□□□ 0.01
RPP40-201ENST00000319533 ATP8B3O60423 1300 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 C4BPAP04003 597 aaKnown RBP15.08■□□□□ 0
RPP40-201ENST00000319533 DPP6P42658 865 aa15.08■□□□□ 0
RPP40-201ENST00000319533 DHPSP49366 369 aaPredicted RBP15.08■□□□□ 0
RPP40-201ENST00000319533 SLC5A3P53794 718 aa15.08■□□□□ 0
RPP40-201ENST00000319533 ZNF252P-AS1Q0IIN9 211 aa15.08■□□□□ 0
RPP40-201ENST00000319533 BYSLQ13895 437 aaKnown RBP15.08■□□□□ 0
RPP40-201ENST00000319533 KNOP1Q1ED39 458 aaKnown RBP15.08■□□□□ 0
RPP40-201ENST00000319533 SYT12Q8IV01 421 aa15.08■□□□□ 0
RPP40-201ENST00000319533 PARD3BQ8TEW8 1205 aa15.08■□□□□ 0
RPP40-201ENST00000319533 RLN3Q8WXF3 142 aa15.08■□□□□ 0
RPP40-201ENST00000319533 PIGKQ92643 395 aa15.08■□□□□ 0
RPP40-201ENST00000319533 SPACA7Q96KW9 195 aa15.08■□□□□ 0
RPP40-201ENST00000319533 TMEM121BQ9BXQ6 578 aaPredicted RBP15.08■□□□□ 0
RPP40-201ENST00000319533 SMYD3Q9H7B4 428 aa15.08■□□□□ 0
RPP40-201ENST00000319533 DMAP1Q9NPF5 467 aaPredicted RBP15.08■□□□□ 0
RPP40-201ENST00000319533 DMAC2Q9NW81 257 aa15.08■□□□□ 0
RPP40-201ENST00000319533 CHORDC1Q9UHD1 332 aaPredicted RBP15.08■□□□□ 0
RPP40-201ENST00000319533 STARD13Q9Y3M8 1113 aa15.08■□□□□ 0
RPP40-201ENST00000319533 ASPMQ8IZT6 3477 aa15.08■□□□□ 0
RPP40-201ENST00000319533 MYO18AQ92614 2054 aaKnown RBP15.07■□□□□ 0
RPP40-201ENST00000319533 ASCC3Q8N3C0 2202 aaKnown RBP15.07■□□□□ 0
RPP40-201ENST00000319533 TULP3O75386 442 aa15.07■□□□□ 0
RPP40-201ENST00000319533 HOXD12P35452 270 aa15.07■□□□□ 0
RPP40-201ENST00000319533 CASP4P49662 377 aa15.07■□□□□ 0
RPP40-201ENST00000319533 CDH8P55286 799 aa15.07■□□□□ 0
RPP40-201ENST00000319533 DNM1Q05193 864 aaKnown RBP15.07■□□□□ 0
RPP40-201ENST00000319533 KDSRQ06136 332 aa15.07■□□□□ 0
RPP40-201ENST00000319533 IFRD2Q12894 506 aaPredicted RBP15.07■□□□□ 0
RPP40-201ENST00000319533 LMAN2Q12907 356 aa15.07■□□□□ 0
RPP40-201ENST00000319533 PREPLQ4J6C6 727 aaPredicted RBP15.07■□□□□ 0
RPP40-201ENST00000319533 TTC30AQ86WT1 665 aa15.07■□□□□ 0
RPP40-201ENST00000319533 BBS7Q8IWZ6 715 aa15.07■□□□□ 0
RPP40-201ENST00000319533 FUKQ8N0W3 1084 aa15.07■□□□□ 0
RPP40-201ENST00000319533 FRMD1Q8N878 549 aa15.07■□□□□ 0
RPP40-201ENST00000319533 KDF1Q8NAX2 398 aaPredicted RBP15.07■□□□□ 0
RPP40-201ENST00000319533 ZMIZ2Q8NF64 920 aa15.07■□□□□ 0
RPP40-201ENST00000319533 GOLGA5Q8TBA6 731 aa15.07■□□□□ 0
RPP40-201ENST00000319533 SMARCD1Q96GM5 515 aa15.07■□□□□ 0
RPP40-201ENST00000319533 TNIP3Q96KP6 325 aa15.07■□□□□ 0
RPP40-201ENST00000319533 SDCBP2Q9H190 292 aa15.07■□□□□ 0
RPP40-201ENST00000319533 CCSER2Q9H7U1 834 aa15.07■□□□□ 0
RPP40-201ENST00000319533 CSNK1G1Q9HCP0 422 aa15.07■□□□□ 0
RPP40-201ENST00000319533 SPHK2Q9NRA0 654 aa15.07■□□□□ 0
RPP40-201ENST00000319533 TMEM74BQ9NUR3 256 aa15.07■□□□□ 0
RPP40-201ENST00000319533 FAM13BQ9NYF5 915 aa15.07■□□□□ 0
RPP40-201ENST00000319533 HCN2Q9UL51 889 aa15.07■□□□□ 0
RPP40-201ENST00000319533 ATP6V1DQ9Y5K8 247 aa15.07■□□□□ 0
RPP40-201ENST00000319533 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.06■□□□□ 0
RPP40-201ENST00000319533 TCRBV21S2A2A0A5A6 115 aa15.06■□□□□ 0
RPP40-201ENST00000319533 LRRIQ3A6PVS8 624 aaPredicted RBP15.06■□□□□ 0
RPP40-201ENST00000319533 UPK3BL1B0FP48 263 aa15.06■□□□□ 0
RPP40-201ENST00000319533 UPK3BL2E5RIL1 263 aa15.06■□□□□ 0
RPP40-201ENST00000319533 POLR2DO15514 142 aaKnown RBP15.06■□□□□ 0
RPP40-201ENST00000319533 GREM1O60565 184 aa15.06■□□□□ 0
RPP40-201ENST00000319533 EXOC3O60645 756 aa15.06■□□□□ 0
RPP40-201ENST00000319533 PHACTR2O75167 634 aa15.06■□□□□ 0
RPP40-201ENST00000319533 VNN1O95497 513 aa15.06■□□□□ 0
RPP40-201ENST00000319533 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
RPP40-201ENST00000319533 CASP1P29466 404 aa15.06■□□□□ 0
RPP40-201ENST00000319533 PTGER3P43115 390 aa15.06■□□□□ 0
RPP40-201ENST00000319533 NCOA4Q13772 614 aa15.06■□□□□ 0
RPP40-201ENST00000319533 ZNF699Q32M78 642 aa15.06■□□□□ 0
RPP40-201ENST00000319533 TRIM61Q5EBN2 209 aa15.06■□□□□ 0
RPP40-201ENST00000319533 ZNF667Q5HYK9 610 aa15.06■□□□□ 0
RPP40-201ENST00000319533 BTBD8Q5XKL5 378 aa15.06■□□□□ 0
RPP40-201ENST00000319533 SLC23A3Q6PIS1 610 aa15.06■□□□□ 0
RPP40-201ENST00000319533 UNQ6494/PRO21346Q6UXR6 183 aa15.06■□□□□ 0
RPP40-201ENST00000319533 HTR3DQ70Z44 454 aa15.06■□□□□ 0
RPP40-201ENST00000319533 TRMT11Q7Z4G4 463 aaKnown RBP15.06■□□□□ 0
RPP40-201ENST00000319533 TMEM25Q86YD3 366 aa15.06■□□□□ 0
RPP40-201ENST00000319533 SLC9A9Q8IVB4 645 aa15.06■□□□□ 0
RPP40-201ENST00000319533 TMEFF1Q8IYR6 380 aa15.06■□□□□ 0
RPP40-201ENST00000319533 CRYBG2Q8N1P7 616 aa15.06■□□□□ 0
RPP40-201ENST00000319533 TERB1Q8NA31 727 aa15.06■□□□□ 0
RPP40-201ENST00000319533 WBP2Q969T9 261 aa15.06■□□□□ 0
RPP40-201ENST00000319533 SMOQ99835 787 aa15.06■□□□□ 0
RPP40-201ENST00000319533 BLZF1Q9H2G9 400 aa15.06■□□□□ 0
RPP40-201ENST00000319533 CD248Q9HCU0 757 aa15.06■□□□□ 0
RPP40-201ENST00000319533 SLC39A2Q9NP94 309 aa15.06■□□□□ 0
RPP40-201ENST00000319533 GMIPQ9P107 970 aa15.06■□□□□ 0
RPP40-201ENST00000319533 DEC1Q9P2X7 70 aa15.06■□□□□ 0
RPP40-201ENST00000319533 PILRBQ9UKJ0 227 aa15.06■□□□□ 0
RPP40-201ENST00000319533 SH3BP1Q9Y3L3 701 aa15.06■□□□□ 0
RPP40-201ENST00000319533 GON4LQ3T8J9 2241 aa15.06■□□□□ 0
RPP40-201ENST00000319533 IGF2RP11717 2491 aa15.05■□□□□ 0
RPP40-201ENST00000319533 TBC1D3BA6NDS4 549 aa15.05■□□□□ -0
RPP40-201ENST00000319533 C1QTNF9BB2RNN3 333 aa15.05■□□□□ -0
RPP40-201ENST00000319533 MAP3K13O43283 966 aa15.05■□□□□ -0
RPP40-201ENST00000319533 AP1G2O75843 785 aa15.05■□□□□ -0
RPP40-201ENST00000319533 C1QTNF9P0C862 333 aa15.05■□□□□ -0
RPP40-201ENST00000319533 PGFP49763 221 aa15.05■□□□□ -0
RPP40-201ENST00000319533 KRT85P78386 507 aa15.05■□□□□ -0
RPP40-201ENST00000319533 BIRC3Q13489 604 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms