RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 PPP1R14CQ8TAE6 165 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 MPP4Q96JB8 637 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 GRIP2Q9C0E4 1043 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 TMPRSS4Q9NRS4 437 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.01□□□□□ -0.81
RPGR-201ENST00000318842 ACTL7BQ9Y614 415 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 PSAT1Q9Y617 370 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 TRAFD1O14545 582 aaPredicted RBP10.01□□□□□ -0.81
RPGR-201ENST00000318842 ATP2A1O14983 1001 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 ABHD2P08910 425 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 SAT1P21673 171 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 TCF7P36402 384 aaPredicted RBP10.01□□□□□ -0.81
RPGR-201ENST00000318842 CAP2P40123 477 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 PKNOX1P55347 436 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 PSMC1P62191 440 aaKnown RBP10.01□□□□□ -0.81
RPGR-201ENST00000318842 CUL3Q13618 768 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 CA9Q16790 459 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 RABGAP1LQ5R372 815 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 ARHGEF16Q5VV41 709 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 TRNP1Q6NT89 227 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 MAVSQ7Z434 540 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 ARHGAP22Q7Z5H3 698 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 PPIL6Q8IXY8 311 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 PDIK1LQ8N165 341 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 SMC1BQ8NDV3 1235 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 CERKQ8TCT0 537 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 TRAPPC12Q8WVT3 735 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 AKT1S1Q96B36 256 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 RBM41Q96IZ5 413 aaKnown RBP10.01□□□□□ -0.81
RPGR-201ENST00000318842 SPATA16Q9BXB7 569 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 CISHQ9NSE2 258 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 DNAJC16Q9Y2G8 782 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 TDRKHQ9Y2W6 561 aaKnown RBP10.01□□□□□ -0.81
RPGR-201ENST00000318842 SNCAIPQ9Y6H5 919 aa10.01□□□□□ -0.81
RPGR-201ENST00000318842 A0A088AWK7 358 aa10□□□□□ -0.81
RPGR-201ENST00000318842 TMX2-CTNND1H3BSU7 103 aa10□□□□□ -0.81
RPGR-201ENST00000318842 ERBB2P04626 1255 aa10□□□□□ -0.81
RPGR-201ENST00000318842 FGFR3P22607 806 aa10□□□□□ -0.81
RPGR-201ENST00000318842 RBL1P28749 1068 aa10□□□□□ -0.81
RPGR-201ENST00000318842 OCRLQ01968 901 aa10□□□□□ -0.81
RPGR-201ENST00000318842 DPYSL3Q14195 570 aa10□□□□□ -0.81
RPGR-201ENST00000318842 LBRQ14739 615 aaKnown RBP10□□□□□ -0.81
RPGR-201ENST00000318842 TCEAL1Q15170 157 aa10□□□□□ -0.81
RPGR-201ENST00000318842 SYDE1Q6ZW31 735 aaPredicted RBP10□□□□□ -0.81
RPGR-201ENST00000318842 RCOR2Q8IZ40 523 aa10□□□□□ -0.81
RPGR-201ENST00000318842 SLC35B2Q8TB61 432 aa10□□□□□ -0.81
RPGR-201ENST00000318842 GDPD5Q8WTR4 605 aa10□□□□□ -0.81
RPGR-201ENST00000318842 CNBD2Q96M20 576 aa10□□□□□ -0.81
RPGR-201ENST00000318842 PRDM16Q9HAZ2 1276 aa10□□□□□ -0.81
RPGR-201ENST00000318842 TMX2Q9Y320 296 aa10□□□□□ -0.81
RPGR-201ENST00000318842 UBE4BO95155 1302 aa10□□□□□ -0.81
RPGR-201ENST00000318842 SYNJ2BP-COX16A0A087WUM0 186 aa10□□□□□ -0.81
RPGR-201ENST00000318842 P4HA2O15460 535 aa10□□□□□ -0.81
RPGR-201ENST00000318842 CFLARO15519 480 aa10□□□□□ -0.81
RPGR-201ENST00000318842 DCXO43602 365 aa10□□□□□ -0.81
RPGR-201ENST00000318842 RGS20O76081 388 aa10□□□□□ -0.81
RPGR-201ENST00000318842 RAG1P15918 1043 aa10□□□□□ -0.81
RPGR-201ENST00000318842 PCSK6P29122 969 aa10□□□□□ -0.81
RPGR-201ENST00000318842 MIPP30301 263 aa10□□□□□ -0.81
RPGR-201ENST00000318842 MAN1A1P33908 653 aa10□□□□□ -0.81
RPGR-201ENST00000318842 CDH6P55285 790 aa10□□□□□ -0.81
RPGR-201ENST00000318842 GCNT1Q02742 428 aa10□□□□□ -0.81
RPGR-201ENST00000318842 CMC1Q7Z7K0 106 aa10□□□□□ -0.81
RPGR-201ENST00000318842 DEFB107AQ8IZN7 70 aa10□□□□□ -0.81
RPGR-201ENST00000318842 ZSCAN18Q8TBC5 510 aaPredicted RBP10□□□□□ -0.81
RPGR-201ENST00000318842 E2F7Q96AV8 911 aa10□□□□□ -0.81
RPGR-201ENST00000318842 APOPT1Q96IL0 206 aa10□□□□□ -0.81
RPGR-201ENST00000318842 TTC25Q96NG3 672 aa10□□□□□ -0.81
RPGR-201ENST00000318842 RIT2Q99578 217 aa10□□□□□ -0.81
RPGR-201ENST00000318842 KLHL4Q9C0H6 718 aa10□□□□□ -0.81
RPGR-201ENST00000318842 R3HDMLQ9H3Y0 253 aa10□□□□□ -0.81
RPGR-201ENST00000318842 AVENQ9NQS1 362 aaPredicted RBP10□□□□□ -0.81
RPGR-201ENST00000318842 CYP26B1Q9NR63 512 aa10□□□□□ -0.81
RPGR-201ENST00000318842 COX16Q9P0S2 106 aa10□□□□□ -0.81
RPGR-201ENST00000318842 IP6K2Q9UHH9 426 aa10□□□□□ -0.81
RPGR-201ENST00000318842 STRIP2Q9ULQ0 834 aa10□□□□□ -0.81
RPGR-201ENST00000318842 CAPN14A8MX76 684 aa10□□□□□ -0.81
RPGR-201ENST00000318842 B4GALT5O43286 388 aa10□□□□□ -0.81
RPGR-201ENST00000318842 BUD23O43709 281 aaKnown RBP10□□□□□ -0.81
RPGR-201ENST00000318842 USP12O75317 370 aa10□□□□□ -0.81
RPGR-201ENST00000318842 STAM2O75886 525 aa10□□□□□ -0.81
RPGR-201ENST00000318842 RABGGTBP53611 331 aa10□□□□□ -0.81
RPGR-201ENST00000318842 YWHAZP63104 245 aaKnown RBP10□□□□□ -0.81
RPGR-201ENST00000318842 CCNIQ14094 377 aa10□□□□□ -0.81
RPGR-201ENST00000318842 DLG2Q15700 870 aa10□□□□□ -0.81
RPGR-201ENST00000318842 LIN52Q52LA3 116 aa10□□□□□ -0.81
RPGR-201ENST00000318842 TP53INP2Q8IXH6 220 aa10□□□□□ -0.81
RPGR-201ENST00000318842 C12orf29Q8N999 325 aa10□□□□□ -0.81
RPGR-201ENST00000318842 ATG4CQ96DT6 458 aa10□□□□□ -0.81
RPGR-201ENST00000318842 PCDH9Q9HC56 1237 aa10□□□□□ -0.81
RPGR-201ENST00000318842 MRPL47Q9HD33 250 aaKnown RBP10□□□□□ -0.81
RPGR-201ENST00000318842 ZC3H7BQ9UGR2 993 aaKnown RBP10□□□□□ -0.81
RPGR-201ENST00000318842 WDR64B1ANS9 1081 aa9.99□□□□□ -0.81
RPGR-201ENST00000318842 SPECC1L-ADORA2AF8WAN1 911 aa9.99□□□□□ -0.81
RPGR-201ENST00000318842 HMGCRP04035 888 aa9.99□□□□□ -0.81
RPGR-201ENST00000318842 KRT3P12035 628 aa9.99□□□□□ -0.81
RPGR-201ENST00000318842 FUT4P22083 530 aa9.99□□□□□ -0.81
RPGR-201ENST00000318842 HSPA1LP34931 641 aa9.99□□□□□ -0.81
RPGR-201ENST00000318842 SERPINB5P36952 375 aa9.99□□□□□ -0.81
RPGR-201ENST00000318842 SLC25A11Q02978 314 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms