RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CD19P15391 556 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 MAGEA6P43360 314 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 GABRB2P47870 512 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 EFNA5P52803 228 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 ROR2Q01974 943 aaKnown RBP19.87■□□□□ 0.77
RTN4-201ENST00000317610 TBCCQ15814 346 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 MYLK4Q86YV6 388 aaPredicted RBP19.87■□□□□ 0.77
RTN4-201ENST00000317610 SCUBE1Q8IWY4 988 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 RTKN2Q8IZC4 609 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 PPM1NQ8N819 430 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 FBXO27Q8NI29 283 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 CFAP36Q96G28 342 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 PEBP4Q96S96 227 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 ACO2Q99798 780 aaKnown RBP19.87■□□□□ 0.77
RTN4-201ENST00000317610 MECRQ9BV79 373 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 CALN1Q9BXU9 219 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 C2CD2Q9Y426 696 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.87■□□□□ 0.77
RTN4-201ENST00000317610 CXorf49A8MYA2 514 aaPredicted RBP19.86■□□□□ 0.77
RTN4-201ENST00000317610 ENO1P06733 434 aaKnown RBP19.86■□□□□ 0.77
RTN4-201ENST00000317610 KCNA3P22001 575 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 CPA2P48052 419 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 NBPF20Q3BBV1 942 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 DNAL1Q4LDG9 190 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 FAM47CQ5HY64 1035 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 LGSNQ5TDP6 509 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 RNF220Q5VTB9 566 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 CYP4V2Q6ZWL3 525 aaPredicted RBP19.86■□□□□ 0.77
RTN4-201ENST00000317610 PHC3Q8NDX5 983 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 NR1H4Q96RI1 486 aaPredicted RBP19.86■□□□□ 0.77
RTN4-201ENST00000317610 CCDC106Q9BWC9 280 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 MAF1Q9H063 256 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 QTRT2Q9H974 415 aaKnown RBP19.86■□□□□ 0.77
RTN4-201ENST00000317610 SCAF8Q9UPN6 1271 aaKnown RBP19.86■□□□□ 0.77
RTN4-201ENST00000317610 SNNO75324 88 aaPredicted RBP19.86■□□□□ 0.77
RTN4-201ENST00000317610 CACNA2D1P54289 1103 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 ACTR3P61158 418 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 TMPRSS15P98073 1019 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 MMRN1Q13201 1228 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 TFDP2Q14188 446 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 ARID3BQ8IVW6 561 aaPredicted RBP19.86■□□□□ 0.77
RTN4-201ENST00000317610 TCHPQ9BT92 498 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 BCO2Q9BYV7 579 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 SDCBP2Q9H190 292 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 PIDD1Q9HB75 910 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 ZNF277Q9NRM2 450 aaPredicted RBP19.86■□□□□ 0.77
RTN4-201ENST00000317610 ASNSD1Q9NWL6 643 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 PPARGC1AQ9UBK2 798 aaKnown RBP19.86■□□□□ 0.77
RTN4-201ENST00000317610 DOCK1Q14185 1865 aa19.86■□□□□ 0.77
RTN4-201ENST00000317610 LOC285556D6RIA3 1793 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 SPECC1L-ADORA2AF8WAN1 911 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 ANPEPP15144 967 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 TFAMQ00059 246 aaKnown RBP19.85■□□□□ 0.77
RTN4-201ENST00000317610 CNTN2Q02246 1040 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 FOXB2Q5VYV0 432 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 CTAGE3PQ8IX95 158 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 MTBPQ96DY7 904 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 PANX3Q96QZ0 392 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 PCYT2Q99447 389 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 C1orf21Q9H246 121 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 GPAMQ9HCL2 828 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 RAB6BQ9NRW1 208 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 BACE1P56817 501 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 TMEM132BQ14DG7 1078 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 CHI3L2Q15782 390 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 RIPOR1Q6ZS17 1223 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 ULK2Q8IYT8 1036 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 ACAP3Q96P50 834 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 LBHD1Q9BQE6 289 aaPredicted RBP19.85■□□□□ 0.77
RTN4-201ENST00000317610 ACAD9Q9H845 621 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 SMYD2Q9NRG4 433 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 PDP2Q9P2J9 529 aa19.85■□□□□ 0.77
RTN4-201ENST00000317610 ZC3H7BQ9UGR2 993 aaKnown RBP19.85■□□□□ 0.77
RTN4-201ENST00000317610 MGAMO43451 1857 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 B4GALT4O60513 344 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 MAFO75444 373 aaPredicted RBP19.84■□□□□ 0.77
RTN4-201ENST00000317610 CIB2O75838 187 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 SNUPNO95149 360 aaKnown RBP19.84■□□□□ 0.77
RTN4-201ENST00000317610 TNNC2P02585 160 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 ZNF143P52747 638 aaPredicted RBP19.84■□□□□ 0.77
RTN4-201ENST00000317610 HIRAP54198 1017 aaPredicted RBP19.84■□□□□ 0.77
RTN4-201ENST00000317610 INHBEP58166 350 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 SARNPP82979 210 aaKnown RBP19.84■□□□□ 0.77
RTN4-201ENST00000317610 KYAT3Q6YP21 454 aaKnown RBP19.84■□□□□ 0.77
RTN4-201ENST00000317610 CAND1Q86VP6 1230 aaKnown RBP19.84■□□□□ 0.77
RTN4-201ENST00000317610 NRBP2Q9NSY0 501 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 HBS1LQ9Y450 684 aaKnown RBP19.84■□□□□ 0.77
RTN4-201ENST00000317610 H7C0C1 242 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 BIRC5O15392 142 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 SERPINA6P08185 405 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 OSBPP22059 807 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 RAP1GAPP47736 663 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 ATP5OP48047 213 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 GCLCP48506 637 aaPredicted RBP19.84■□□□□ 0.77
RTN4-201ENST00000317610 CDH6P55285 790 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 C6orf163Q5TEZ5 329 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 CRLF3Q8IUI8 442 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 PRPF31Q8WWY3 499 aaKnown RBP19.84■□□□□ 0.77
RTN4-201ENST00000317610 LRRC39Q96DD0 335 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 RNF157Q96PX1 679 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms