RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 CCDC130P13994 396 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 EPHB1P54762 984 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 BMPR2Q13873 1038 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 CHI3L2Q15782 390 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 FAM183BPQ6ZVS7 135 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 NLRP9Q7RTR0 991 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 LONP2Q86WA8 852 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 SLC26A11Q86WA9 606 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 ARID3BQ8IVW6 561 aaPredicted RBP13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 AGGF1Q8N302 714 aaeCLIP13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 CPXM1Q96SM3 734 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 COL4A1P02462 1669 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 C3orf70A6NLC5 250 aaPredicted RBP13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 SRRM3A6NNA2 597 aaPredicted RBP13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 RBL1P28749 1068 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 RPL22P35268 128 aaKnown RBP13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 ZNF143P52747 638 aaPredicted RBP13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 MAP3K7CLP57077 242 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 ADIGQ0VDE8 80 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 DPYSL3Q14195 570 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 BBS12Q6ZW61 710 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 USP50Q70EL3 339 aaPredicted RBP13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 EXT2Q93063 718 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 CEP41Q9BYV8 373 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 TIMM13Q9Y5L4 95 aaPredicted RBP13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 LAMB1P07942 1786 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 FZD9O00144 591 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 DRD4P21917 467 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 MMP13P45452 471 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 RAD23BP54727 409 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 POU5F1BQ06416 359 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 TSHZ1Q6ZSZ6 1077 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 POLNQ7Z5Q5 900 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 TLK2Q86UE8 772 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 MYH4Q9Y623 1939 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 O00370 1275 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 TGM2P21980 687 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 QPCTQ16769 361 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 TCP10LQ8TDR4 215 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 GPR88Q9GZN0 384 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 KRT82Q9NSB4 513 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 RPS6KL1Q9Y6S9 549 aa13.91□□□□□ -0.18
PCDHB9-201ENST00000316105 ITGAVP06756 1048 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 FDFT1P37268 417 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 C1orf146Q5VVC0 180 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 TFAP2BQ92481 460 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 TRIM62Q9BVG3 475 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 NOD2Q9HC29 1040 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 DONSONQ9NYP3 566 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 HAO1Q9UJM8 370 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 AMPD1P23109 780 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 PMLP29590 882 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 C1orf127Q8N9H9 656 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 OR6P1Q8NGX9 317 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 TINF2Q9BSI4 451 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 FAM96AQ9H5X1 160 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 CYP4F11Q9HBI6 524 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 STOML1Q9UBI4 398 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 GPR25O00155 361 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 TRUB2O95900 331 aaKnown RBP13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 LMNAP02545 664 aaKnown RBP13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 CFHP08603 1231 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 NQO1P15559 274 aaKnown RBP13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 KLC3Q6P597 504 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 ATPAF2Q8N5M1 289 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 URGCPQ8TCY9 931 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 ABCF3Q9NUQ8 709 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 PIH1D1Q9NWS0 290 aaKnown RBP13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 HEY2Q9UBP5 337 aa13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 MTO1Q9Y2Z2 717 aaKnown RBP13.9□□□□□ -0.18
PCDHB9-201ENST00000316105 ERBB2P04626 1255 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 PGM1P36871 562 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 TKTL1P51854 596 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 MFSD10Q14728 455 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 PRAMEF19Q5SWL8 479 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 ZDHHC24Q6UX98 284 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 C12orf50Q8NA57 414 aaPredicted RBP13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 GRID1Q9ULK0 1009 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 LTBP4Q8N2S1 1624 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 MAP3K7O43318 606 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 SNX3O60493 162 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 APOEP02649 317 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 SKIP12755 728 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 YY1P25490 414 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 RGS2P41220 211 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 RNF135Q8IUD6 432 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 DEFB106AQ8N104 65 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 CKAP2Q8WWK9 683 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 BEGAINQ9BUH8 593 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 WDCPQ9H6R7 721 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 SP110Q9HB58 689 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 ZFYVE28Q9HCC9 887 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 C20orf96Q9NUD7 363 aaPredicted RBP13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 ZDHHC18Q9NUE0 388 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 ANGPTL2Q9UKU9 493 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 C2CD2Q9Y426 696 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 SDR42E2A6NKP2 422 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 PFDN6O15212 129 aa13.89□□□□□ -0.19
PCDHB9-201ENST00000316105 GMNNO75496 209 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms