RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 TBC1D3Q8IZP1 549 aaPredicted RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 SNF8Q96H20 258 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 SOHLH2Q9NX45 425 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 COL20A1Q9P218 1284 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 USP18Q9UMW8 372 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 RAMP2O60895 175 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 SH3BGRLO75368 114 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 RASSF9O75901 435 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 TPH1P17752 444 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 PTGER2P43116 358 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 PHEXP78562 749 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 PLIN5Q00G26 463 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 PHKG1Q16816 387 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 ZC3H12AQ5D1E8 599 aaKnown RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 SLC24A5Q71RS6 500 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 KCTD10Q9H3F6 313 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 DNMT3LQ9UJW3 386 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 SHOC2Q9UQ13 582 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 SLIT2O94813 1529 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 XRN1Q8IZH2 1706 aaKnown RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 PCNAP12004 261 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 NRIP1P48552 1158 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 CARSP49589 748 aaKnown RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 ITGB3BPQ13352 177 aaPredicted RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 NNTQ13423 1086 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 PLPPR4Q7Z2D5 763 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 PTAR1Q7Z6K3 402 aaPredicted RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 GLIS3Q8NEA6 775 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 JADE3Q92613 823 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 CDT1Q9H211 546 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 CFAP97Q9P2B7 532 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 LCMT1Q9UIC8 334 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 TRBV23OR9-2A0A075B6M9 112 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 ARVCFO00192 962 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 KRT38O76015 456 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 POLBP06746 335 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 ARF4P18085 180 aaPredicted RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 SLC1A1P43005 524 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 WASHC5Q12768 1159 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 FAM47EQ6ZV65 393 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 ARMCX6Q7L4S7 300 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 NIPA1Q7RTP0 329 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 ZNF614Q8N883 585 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 ZSWIM2Q8NEG5 633 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 NDRG1Q92597 394 aaKnown RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 EXOC2Q96KP1 924 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 CDK5RAP1Q96SZ6 601 aaKnown RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 ACO2Q99798 780 aaKnown RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 MSH3P20585 1137 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 CENPAP49450 140 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 CLCNKBP51801 687 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 UAP1L1Q3KQV9 507 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 TRMT10CQ7L0Y3 403 aaKnown RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 ZNF669Q96BR6 464 aaPredicted RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 RSRC1Q96IZ7 334 aaKnown RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.33□□□□□ -0.92
CTC1-201ENST00000315684 PLAAQ9Y263 795 aa9.33□□□□□ -0.92
CTC1-201ENST00000315684 CCT5P48643 541 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 GATMP50440 423 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 RAP1GDS1P52306 607 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 DCLRE1AQ6PJP8 1040 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 CXorf40AQ8TE69 158 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.32□□□□□ -0.925e-7■■■■□ 25.4
CTC1-201ENST00000315684 BRD8Q9H0E9 1235 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 RGS17Q9UGC6 210 aaPredicted RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 APPL1Q9UKG1 709 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 CHD2O14647 1828 aaKnown RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 A0A1W2PQ45 241 aaPredicted RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 A0A1W2PQY0 241 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 GUCA1CO95843 209 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 MAP2K2P36507 400 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 FXR1P51114 621 aaKnown RBP eCLIP9.32□□□□□ -0.92
CTC1-201ENST00000315684 BOP1Q14137 746 aaKnown RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 IRAK1BP1Q5VVH5 260 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 PIK3R5Q8WYR1 880 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 OSBPL8Q9BZF1 889 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 SPASTQ9UBP0 616 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 CNTNAP1P78357 1384 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 PSMD10O75832 226 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 AMD1P17707 334 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 EIF3BP55884 814 aaKnown RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 LRRC14Q15048 493 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 ARHGAP24Q8N264 748 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 ATG4AQ8WYN0 398 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 TASP1Q9H6P5 420 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 RBM22Q9NW64 420 aaKnown RBP eCLIP9.32□□□□□ -0.92
CTC1-201ENST00000315684 ZC3H7BQ9UGR2 993 aaKnown RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 KLHL3Q9UH77 587 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 GOLGA8KD6RF30 607 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 PPP1R11O60927 126 aaPredicted RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 RBP3P10745 1247 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 GJA1P17302 382 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 PMS1P54277 932 aaKnown RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 PRMT2P55345 433 aa9.32□□□□□ -0.92
CTC1-201ENST00000315684 SMAD3P84022 425 aaKnown RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 CAMK2GQ13555 558 aaPredicted RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 RRP1BQ14684 758 aaKnown RBP9.32□□□□□ -0.92
CTC1-201ENST00000315684 SLC18A3Q16572 532 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms