RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PSD3Q9NYI0 1048 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 LRRC8EQ6NSJ5 796 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 DOK6Q6PKX4 331 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 ZPBP2Q6X784 338 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 LNPEPQ9UIQ6 1025 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 RPS6KL1Q9Y6S9 549 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 AOC2O75106 756 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 ZBTB48P10074 688 aaPredicted RBP13.96□□□□□ -0.17
RFFL-201ENST00000315249 RRM1P23921 792 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 SLC12A3P55017 1021 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 NUP93Q8N1F7 819 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 WDR24Q96S15 920 aa13.96□□□□□ -0.17
RFFL-201ENST00000315249 TSEN34Q9BSV6 310 aaKnown RBP13.96□□□□□ -0.17
RFFL-201ENST00000315249 RBM22Q9NW64 420 aaKnown RBP eCLIP13.96□□□□□ -0.172e-7■■■■□ 22.2
RFFL-201ENST00000315249 A0A1W2PQJ5 194 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 PDZK1P1A8MUH7 402 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 HDCP19113 662 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 ITIH2P19823 946 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 PTK7Q13308 1070 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 KRT72Q14CN4 511 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 USP41Q3LFD5 358 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 GTF3C4Q9UKN8 822 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 MROH1Q8NDA8 1641 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 IFRD1O00458 451 aaPredicted RBP13.96□□□□□ -0.18
RFFL-201ENST00000315249 FGBP02675 491 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 ITGB6P18564 788 aa13.96□□□□□ -0.18
RFFL-201ENST00000315249 GEMIN4P57678 1058 aaKnown RBP13.96□□□□□ -0.18
RFFL-201ENST00000315249 TRMT11Q7Z4G4 463 aaKnown RBP13.96□□□□□ -0.18
RFFL-201ENST00000315249 RIC1Q4ADV7 1423 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 ATP5BP06576 529 aaKnown RBP13.95□□□□□ -0.18
RFFL-201ENST00000315249 CTSEP14091 401 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 ARFIP2P53365 341 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 HES6Q96HZ4 224 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 VANGL2Q9ULK5 521 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 RNF112Q9ULX5 631 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 FRMD3A2A2Y4 597 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 KRT4P19013 534 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 PDK2Q15119 407 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 COPS7BQ9H9Q2 264 aaPredicted RBP13.95□□□□□ -0.18
RFFL-201ENST00000315249 CACNA2D2Q9NY47 1150 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 MARCOQ9UEW3 520 aaPredicted RBP13.95□□□□□ -0.18
RFFL-201ENST00000315249 VPS9D1Q9Y2B5 631 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 FDFT1P37268 417 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 FICDQ9BVA6 458 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 CEP41Q9BYV8 373 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 TEKT2Q9UIF3 430 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 ANGPT2O15123 496 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 MAPTP10636 758 aaKnown RBP13.95□□□□□ -0.18
RFFL-201ENST00000315249 ATP5C1P36542 298 aaKnown RBP13.95□□□□□ -0.18
RFFL-201ENST00000315249 SLC20A1Q8WUM9 679 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 JADE3Q92613 823 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 FARP2O94887 1054 aaPredicted RBP13.95□□□□□ -0.18
RFFL-201ENST00000315249 INHAP05111 366 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 EIF2B5Q13144 721 aaKnown RBP13.95□□□□□ -0.18
RFFL-201ENST00000315249 ERMARDQ5T6L9 678 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 DLK2Q6UY11 383 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 DSG4Q86SJ6 1040 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 COG1Q8WTW3 980 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 SGF29Q96ES7 293 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 MARCH2Q9P0N8 246 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 TDRKHQ9Y2W6 561 aaKnown RBP13.95□□□□□ -0.18
RFFL-201ENST00000315249 NDUFB5O43674 189 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 CRTAMO95727 393 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 ITGA8P53708 1063 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 HPCAP84074 193 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 EVX2Q03828 476 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 RETSATQ6NUM9 610 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 C4orf33Q8N1A6 199 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 TPCN2Q8NHX9 752 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 MTBPQ96DY7 904 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 LRRC37BQ96QE4 947 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 FAM129AQ9BZQ8 928 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 OLFML3Q9NRN5 406 aa13.95□□□□□ -0.18
RFFL-201ENST00000315249 ASGR1P07306 291 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 MMP3P08254 477 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 MSH3P20585 1137 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 GRK3P35626 688 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 GYS2P54840 703 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 PPP2R2AP63151 447 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 MARC1Q5VT66 337 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 LPCAT1Q8NF37 534 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 LENG1Q96BZ8 264 aaPredicted RBP13.94□□□□□ -0.18
RFFL-201ENST00000315249 ERGIC2Q96RQ1 377 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 A0A087X0T9 212 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 PSTPIP1O43586 416 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 FAM228BP0C875 321 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 CRYBB1P53674 252 aaPredicted RBP13.94□□□□□ -0.18
RFFL-201ENST00000315249 ALDH18A1P54886 795 aaKnown RBP13.94□□□□□ -0.18
RFFL-201ENST00000315249 UBE2OQ9C0C9 1292 aaKnown RBP13.94□□□□□ -0.18
RFFL-201ENST00000315249 ZNF518BQ9C0D4 1074 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 ATP8B1O43520 1251 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 TRADDQ15628 312 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 SNCBQ16143 134 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 RFX8Q6ZV50 586 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 SERPINB11Q96P15 392 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 CARNS1A5YM72 827 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 ITGALP20701 1170 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 CYP2F1P24903 491 aa13.94□□□□□ -0.18
RFFL-201ENST00000315249 ATP6V1E1P36543 226 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms