RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 WDR90Q96KV7 1748 aa26.39■■□□□ 1.81
HOXB3-201ENST00000311626 TRIM49D1C9J1S8 452 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 NDC80O14777 642 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 HCRTO43612 131 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 ATP5HO75947 161 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 APRTP07741 180 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 ARF4P18085 180 aaPredicted RBP26.38■■□□□ 1.81
HOXB3-201ENST00000311626 SERPINB3P29508 390 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 YWHAZP63104 245 aaKnown RBP26.38■■□□□ 1.81
HOXB3-201ENST00000311626 CTC1Q2NKJ3 1217 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 PARP6Q2NL67 630 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 SLC45A4Q5BKX6 768 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 FRMD8P1Q9BZ68 369 aaPredicted RBP26.38■■□□□ 1.81
HOXB3-201ENST00000311626 SLC13A1Q9BZW2 595 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 DENND2DQ9H6A0 471 aaPredicted RBP26.38■■□□□ 1.81
HOXB3-201ENST00000311626 SSU72Q9NP77 194 aaKnown RBP26.38■■□□□ 1.81
HOXB3-201ENST00000311626 CCDC195A0A1B0GUA6 201 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 C22orf31O95567 290 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 VDRP11473 427 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 GOLGA7BQ2TAP0 167 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 PMF1Q6P1K2 205 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 PQLC3Q8N755 202 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 FAM167BQ9BTA0 163 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 TMEM120AQ9BXJ8 343 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 CSADQ9Y600 493 aa26.38■■□□□ 1.81
HOXB3-201ENST00000311626 IQANK1A0A1B0GTG1 560 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 TM9SF1O15321 606 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 SKAP2O75563 359 aaPredicted RBP26.37■■□□□ 1.81
HOXB3-201ENST00000311626 NUDCD1Q96RS6 583 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 SMARCAD1Q9H4L7 1026 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 KCNK13Q9HB14 408 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 SMYD2Q9NRG4 433 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 SLC5A4Q9NY91 659 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 PPEF2O14830 753 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 GAS2O43903 313 aaKnown RBP26.37■■□□□ 1.81
HOXB3-201ENST00000311626 NEK3P51956 506 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 TMEM132DQ14C87 1099 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 AMHR2Q16671 573 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 PPP1R26Q5T8A7 1209 aaPredicted RBP26.37■■□□□ 1.81
HOXB3-201ENST00000311626 ACOT1Q86TX2 421 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 FAM172AQ8WUF8 416 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 TRIM55Q9BYV6 548 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 VPS11Q9H270 941 aa26.37■■□□□ 1.81
HOXB3-201ENST00000311626 ETV4P43268 484 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 ARFIP2P53365 341 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 ZBTB16Q05516 673 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 CCDC62Q6P9F0 684 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 PCDH19Q8TAB3 1148 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 PLAC1Q9HBJ0 212 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 ARMCX1Q9P291 453 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 FETUBQ9UGM5 382 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 TTLL3Q9Y4R7 772 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 PAPPA2Q9BXP8 1791 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 FAM237BA0A1B0GVD1 139 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 HBP1O60381 514 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 ENDOD1O94919 500 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 TOP3BO95985 862 aaKnown RBP26.36■■□□□ 1.81
HOXB3-201ENST00000311626 ZNF286BP0CG31 522 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 STIP1P31948 543 aaKnown RBP26.36■■□□□ 1.81
HOXB3-201ENST00000311626 SH2D5Q6ZV89 423 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 INPP5DQ92835 1189 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 APOPT1Q96IL0 206 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 RBPJLQ9UBG7 517 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 GINS2Q9Y248 185 aa26.36■■□□□ 1.81
HOXB3-201ENST00000311626 CYB561D2O14569 222 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 PCK1P35558 622 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 BCAR1P56945 870 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 TRIM68Q6AZZ1 485 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 RPAINQ86UA6 219 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 CAND1Q86VP6 1230 aaKnown RBP26.35■■□□□ 1.81
HOXB3-201ENST00000311626 MPP5Q8N3R9 675 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 MMP19Q99542 508 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 MRPL45Q9BRJ2 306 aaKnown RBP26.35■■□□□ 1.81
HOXB3-201ENST00000311626 DPP3Q9NY33 737 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 ZC3H7BQ9UGR2 993 aaKnown RBP26.35■■□□□ 1.81
HOXB3-201ENST00000311626 BARX2Q9UMQ3 279 aaPredicted RBP26.35■■□□□ 1.81
HOXB3-201ENST00000311626 GRIA1P42261 906 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 CLEC4CQ8WTT0 213 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 MIEF2Q96C03 454 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 SRPK1Q96SB4 655 aaKnown RBP26.35■■□□□ 1.81
HOXB3-201ENST00000311626 RNPEPL1Q9HAU8 725 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 PRMT7Q9NVM4 692 aaPredicted RBP26.35■■□□□ 1.81
HOXB3-201ENST00000311626 LOC285556D6RIA3 1793 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 ZBED1O96006 694 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 PTPN4P29074 926 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 CPA2P48052 419 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 CES4AQ5XG92 561 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 SNRNP25Q9BV90 132 aaKnown RBP26.35■■□□□ 1.81
HOXB3-201ENST00000311626 CADM1Q9BY67 442 aaKnown RBP26.35■■□□□ 1.81
HOXB3-201ENST00000311626 PCDH18Q9HCL0 1135 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 PIH1D1Q9NWS0 290 aaKnown RBP26.35■■□□□ 1.81
HOXB3-201ENST00000311626 MAD1L1Q9Y6D9 718 aa26.35■■□□□ 1.81
HOXB3-201ENST00000311626 GABBR2O75899 941 aa26.34■■□□□ 1.81
HOXB3-201ENST00000311626 PHKA2P46019 1235 aa26.34■■□□□ 1.81
HOXB3-201ENST00000311626 TFDP2Q14188 446 aa26.34■■□□□ 1.81
HOXB3-201ENST00000311626 KCTD2Q14681 263 aa26.34■■□□□ 1.81
HOXB3-201ENST00000311626 TRMT10BQ6PF06 316 aaKnown RBP26.34■■□□□ 1.81
HOXB3-201ENST00000311626 BZW1Q7L1Q6 419 aaKnown RBP26.34■■□□□ 1.81
HOXB3-201ENST00000311626 KIF12Q96FN5 646 aa26.34■■□□□ 1.81
HOXB3-201ENST00000311626 NME7Q9Y5B8 376 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms