RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 CTTNBP2Q8WZ74 1663 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ANKRD30AQ9BXX3 1397 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PIK3C2AO00443 1686 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MTCL1Q9Y4B5 1905 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 TRIM43BA6NCK2 446 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GNAT3A8MTJ3 354 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 UPK3BL1B0FP48 263 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 UPK3BL2E5RIL1 263 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CD3EAPO15446 510 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 SH3BP5O60239 455 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SCGNO76038 276 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GJB6O95452 261 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 KRT19P08727 400 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PYGMP11217 842 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 HTR1BP28222 390 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PRKAR1BP31321 381 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PSMC2P35998 433 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 PPM1FP49593 454 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 RBM5P52756 815 aaKnown RBP eCLIP1.33□□□□□ -2.2
CEP290-201ENST00000309041 NFIAQ12857 509 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SPIDRQ14159 915 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 NFIXQ14938 502 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 NPTX1Q15818 432 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SNCBQ16143 134 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SLFNL1Q499Z3 407 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 AARS2Q5JTZ9 985 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 MFSD14BQ5SR56 506 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SYCP2LQ5T4T6 812 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 HGSNATQ68CP4 663 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PSRC1Q6PGN9 363 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 THSD4Q6ZMP0 1018 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GLRX5Q86SX6 157 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 DEPDC4Q8N2C3 294 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TCEANCQ8N8B7 351 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TMEM102Q8N9M5 508 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 GRPEL2Q8TAA5 225 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GTPBP3Q969Y2 492 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 BOD1Q96IK1 185 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 FOXN4Q96NZ1 517 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RANBP9Q96S59 729 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TSEN34Q9BSV6 310 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 TOLLIPQ9H0E2 274 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MUC13Q9H3R2 512 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 POFUT1Q9H488 388 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 VCPKMTQ9H867 229 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 UBE2J1Q9Y385 318 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 ZNF337Q9Y3M9 751 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CHD4Q14839 1912 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 LRRD1A4D1F6 860 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 E9PAM4 449 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ARHGAP33O14559 1287 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TIMM44O43615 452 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PDE8AO60658 829 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PEX10O60683 326 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 OFD1O75665 1012 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 VNN2O95498 520 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ELFN1P0C7U0 828 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 LAMP2P13473 410 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 FDPSP14324 419 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 TGM2P21980 687 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CDC27P30260 824 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TM4SF1P30408 202 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GJC1P36383 396 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 NPEPPSP55786 919 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 POU6F2P78424 691 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 SRSF1Q07955 248 aaKnown RBP eCLIP1.33□□□□□ -2.2
CEP290-201ENST00000309041 NSUN2Q08J23 767 aaKnown RBP eCLIP1.33□□□□□ -2.2
CEP290-201ENST00000309041 C3orf36Q3SXR2 165 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 DDI2Q5TDH0 399 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CYB5R2Q6BCY4 276 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 LILRA6Q6PI73 481 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CHST15Q7LFX5 561 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 EFL1Q7Z2Z2 1120 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 ITIH5Q86UX2 942 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MIB1Q86YT6 1006 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 C10orf126Q8N4M7 172 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TTLL6Q8N841 843 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SMYD1Q8NB12 490 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RIN3Q8TB24 985 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 DTD1Q8TEA8 209 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 DCAF4Q8WV16 495 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RUFY2Q8WXA3 655 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 NUDT16Q96DE0 195 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 CYYR1Q96J86 154 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PI4K2AQ9BTU6 479 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 HDHD5Q9BXW7 423 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 POMKQ9H5K3 350 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 BRD9Q9H8M2 597 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CD320Q9NPF0 282 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 LUC7LQ9NQ29 371 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 SMOXQ9NWM0 555 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 QPCTLQ9NXS2 382 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 OGFRQ9NZT2 677 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 VAPAQ9P0L0 249 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PURGQ9UJV8 347 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 DMTF1Q9Y222 760 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SF3B6Q9Y3B4 125 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 CLDN16Q9Y5I7 305 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 EIF3AQ14152 1382 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms