RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 APBA3O96018 575 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 APOEP02649 317 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 OASLQ15646 514 aaKnown RBP13.94□□□□□ -0.18
SEC23A-201ENST00000307712 KIF19Q2TAC6 998 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 EFHC2Q5JST6 749 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 ZNF669Q96BR6 464 aaPredicted RBP13.94□□□□□ -0.18
SEC23A-201ENST00000307712 CYB561D2O14569 222 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 STAT5BP51692 787 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 HIRAP54198 1017 aaPredicted RBP13.94□□□□□ -0.18
SEC23A-201ENST00000307712 MGAT5Q09328 741 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 RXFP2Q8WXD0 754 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 MRPL46Q9H2W6 279 aaKnown RBP13.94□□□□□ -0.18
SEC23A-201ENST00000307712 ZNF70Q9UC06 446 aaPredicted RBP13.94□□□□□ -0.18
SEC23A-201ENST00000307712 RPS6KL1Q9Y6S9 549 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 TBC1D12O60347 775 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 CSDE1O75534 798 aaKnown RBP13.94□□□□□ -0.18
SEC23A-201ENST00000307712 SRGAP2BP0DMP2 458 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 ADORA2BP29275 332 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 ABL2P42684 1182 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 EFNA5P52803 228 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 CDH8P55286 799 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 HDAC4P56524 1084 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 ITKQ08881 620 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 PDK3Q15120 406 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 ZACNQ401N2 412 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 LIN52Q52LA3 116 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 RNASEH2BQ5TBB1 312 aaKnown RBP13.94□□□□□ -0.18
SEC23A-201ENST00000307712 C12orf56Q8IXR9 622 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 SEPT12Q8IYM1 358 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 FAM81AQ8TBF8 368 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 FAM151AQ8WW52 585 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 ZNF518BQ9C0D4 1074 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 GPR88Q9GZN0 384 aa13.94□□□□□ -0.18
SEC23A-201ENST00000307712 WDR46O15213 610 aaKnown RBP13.93□□□□□ -0.18
SEC23A-201ENST00000307712 PMLP29590 882 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 BOLA3Q53S33 107 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 DCAF15Q66K64 600 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 TRIM67Q6ZTA4 783 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 ANKS1BQ7Z6G8 1248 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 OR5B17Q8NGF7 314 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 C7orf43Q8WVR3 580 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 CPT1BQ92523 772 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 SLCO2A1Q92959 643 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 ATG4CQ96DT6 458 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 SNX25Q9H3E2 840 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 RABGEF1Q9UJ41 708 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 APOC4-APOC2K7ER74 178 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 APOC2P02655 101 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 LCP1P13796 627 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 RBL1P28749 1068 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 CHRNA5P30532 468 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 MRPS22P82650 360 aaKnown RBP13.93□□□□□ -0.18
SEC23A-201ENST00000307712 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 PHF13Q86YI8 300 aaPredicted RBP13.93□□□□□ -0.18
SEC23A-201ENST00000307712 TDRPQ86YL5 185 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 PIWIL2Q8TC59 973 aaKnown RBP13.93□□□□□ -0.18
SEC23A-201ENST00000307712 CCDC138Q96M89 665 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 PRKAG3Q9UGI9 489 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 TRPC5Q9UL62 973 aaPredicted RBP13.93□□□□□ -0.18
SEC23A-201ENST00000307712 TMEM191CA6NGB0 347 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 AKAP10O43572 662 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 LYPLA1O75608 230 aaPredicted RBP13.93□□□□□ -0.18
SEC23A-201ENST00000307712 CPA3P15088 417 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 SPRP35270 261 aaPredicted RBP13.93□□□□□ -0.18
SEC23A-201ENST00000307712 SOX11P35716 441 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 LRRC38Q5VT99 294 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 CXorf38Q8TB03 319 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 CD101Q93033 1021 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 SGF29Q96ES7 293 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 PFDN4Q9NQP4 134 aa13.93□□□□□ -0.18
SEC23A-201ENST00000307712 WARS2Q9UGM6 360 aaKnown RBP13.93□□□□□ -0.18
SEC23A-201ENST00000307712 N4BP2Q86UW6 1770 aaPredicted RBP13.93□□□□□ -0.18
SEC23A-201ENST00000307712 TPST1O60507 370 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 ZFXP17010 805 aaPredicted RBP13.92□□□□□ -0.18
SEC23A-201ENST00000307712 BNC2Q6ZN30 1099 aaPredicted RBP13.92□□□□□ -0.18
SEC23A-201ENST00000307712 ASRGL1Q7L266 308 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 PLEKHO2Q8TD55 490 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 SLC39A10Q9ULF5 831 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 UMODL1Q5DID0 1318 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 STRNO43815 780 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 RTN3O95197 1032 aaPredicted RBP13.92□□□□□ -0.18
SEC23A-201ENST00000307712 THRAP10827 490 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 PSMC3P17980 439 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 NEK3P51956 506 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 PKNOX1P55347 436 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 NME3Q13232 169 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 ADGRD1Q6QNK2 874 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 CES3Q6UWW8 571 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 BBS12Q6ZW61 710 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 MON1BQ7L1V2 547 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 SLC7A6OSQ96CW6 309 aaPredicted RBP13.92□□□□□ -0.18
SEC23A-201ENST00000307712 CEP41Q9BYV8 373 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 ILKAPQ9H0C8 392 aaPredicted RBP13.92□□□□□ -0.18
SEC23A-201ENST00000307712 COMMD3-BMI1R4GMX3 469 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 TM7SF2O76062 418 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 SERPINE1P05121 402 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 POLBP06746 335 aa13.92□□□□□ -0.18
SEC23A-201ENST00000307712 USP10Q14694 798 aaKnown RBP13.92□□□□□ -0.18
SEC23A-201ENST00000307712 ACBD5Q5T8D3 534 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms