RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 SLC35F5Q8WV83 523 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 EDAQ92838 391 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 USP13Q92995 863 aaPredicted RBP11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ZSWIM1Q9BR11 485 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 RPP25Q9BUL9 199 aaKnown RBP11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 NUP58Q9BVL2 599 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SYNCQ9H7C4 482 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ARHGAP26Q9UNA1 814 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CPQQ9Y646 472 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 USP3Q9Y6I4 520 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PIK3R2O00459 728 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 COCHO43405 550 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CFHP08603 1231 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ZDHHC11BP0C7U3 371 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 RARGP13631 454 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 FERP16591 822 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 GDI1P31150 447 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ATP5C1P36542 298 aaKnown RBP11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 GPD2P43304 727 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 YWHAGP61981 247 aaKnown RBP eCLIP11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SLC7A9P82251 487 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ARID5AQ03989 594 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 USP4Q13107 963 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PDCLQ13371 301 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 MTF1Q14872 753 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ARHGAP29Q52LW3 1261 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 C10orf120Q5SQS8 335 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TAF3Q5VWG9 929 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PMF1Q6P1K2 205 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 POTEHQ6S545 545 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TMEM35BQ8NCS4 154 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 C1orf131Q8NDD1 294 aaKnown RBP11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CSGALNACT1Q8TDX6 532 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 EPS8L1Q8TE68 723 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SH3RF2Q8TEC5 729 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 RNF139Q8WU17 664 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 DNASE1L2Q92874 299 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 KHSRPQ92945 711 aaKnown RBP eCLIP11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 IRF7Q92985 503 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 IQCDQ96DY2 449 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CYP2S1Q96SQ9 504 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TRIM62Q9BVG3 475 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PLA2G2FQ9BZM2 168 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 MIS12Q9H081 205 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SMOC2Q9H3U7 446 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CCSER2Q9H7U1 834 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CYLDQ9NQC7 956 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SLC2A4RGQ9NR83 387 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 OLA1Q9NTK5 396 aaKnown RBP11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SMPD4Q9NXE4 827 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CLIC5Q9NZA1 410 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 RASAL2Q9UJF2 1139 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 STRIP2Q9ULQ0 834 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 MYO6Q9UM54 1294 aa11.55□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CHADO15335 359 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 LSM8O95777 96 aaKnown RBP11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 OLFM2O95897 454 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TCF3P15923 654 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 IFNAR2P48551 515 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 DAOAP59103 153 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ZNF77Q15935 545 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PM20D1Q6GTS8 502 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 NOP9Q86U38 636 aaKnown RBP11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SCML4Q8N228 414 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ZNF397Q8NF99 534 aaPredicted RBP11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 STK32AQ8WU08 396 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 IRGQQ8WZA9 623 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 FAM149B1Q96BN6 582 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PPP1R13BQ96KQ4 1090 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SLC22A12Q96S37 553 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 XPO4Q9C0E2 1151 aaKnown RBP11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 LHX5Q9H2C1 402 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 MFSD1Q9H3U5 465 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 NMUR1Q9HB89 426 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ABCC13Q9NSE7 274 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SEPT11Q9NVA2 429 aaKnown RBP11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 DNMT3LQ9UJW3 386 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 LSM7Q9UK45 103 aaKnown RBP11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CA14Q9ULX7 337 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CCL26Q9Y258 94 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SH3BP1Q9Y3L3 701 aa11.54□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 LRRC53A6NM62 1247 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 E5RJQ4 531 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 LEFTY2O00292 366 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 LTFP02788 710 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 MMEP08473 750 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TPM1P09493 284 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 IRF1P10914 325 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 GPC5P78333 572 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CDR2Q01850 454 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 FCHO2Q0JRZ9 810 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ASIC2Q16515 512 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 FIGNQ5HY92 759 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SFMBT2Q5VUG0 894 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 KLHDC10Q6PID8 442 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TRIM72Q6ZMU5 477 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TRIM67Q6ZTA4 783 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TOGARAM2Q6ZUX3 1019 aa11.53□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SCD5Q86SK9 330 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms