RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ZNF536O15090 1300 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 CCDC189A1A4V9 331 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 IRF6O14896 467 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 PRPSAP2O60256 369 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 T-ENOLP0DO92 83 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 MOXD1Q6UVY6 613 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 GADL1Q6ZQY3 521 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 MCF2L2Q86YR7 1114 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 CLMNQ96JQ2 1002 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 PLA2G4CQ9UP65 541 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 NUMBLQ9Y6R0 609 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 E5RJQ4 531 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 GSC2O15499 205 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 C6orf222P0C671 652 aaPredicted RBP15.17■□□□□ 0.02
PTPN9-201ENST00000306726 VCPP55072 806 aaKnown RBP15.17■□□□□ 0.02
PTPN9-201ENST00000306726 CNTN2Q02246 1040 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 EMC2Q15006 297 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 RALGPS1Q5JS13 557 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 SNX31Q8N9S9 440 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 RIT2Q99578 217 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 JPH1Q9HDC5 661 aaPredicted RBP15.17■□□□□ 0.02
PTPN9-201ENST00000306726 PSMG1O95456 288 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 SLC1A1P43005 524 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 BCAR1P56945 870 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 NOMO3P69849 1222 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 LAYNQ6UX15 382 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 C4orf50Q6ZRC1 276 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 E2F7Q96AV8 911 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 GCNAQ96QF7 691 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 PDGFRBP09619 1106 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 SERPINB5P36952 375 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 GRIA1P42261 906 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 GLRBP48167 497 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 GPX6P59796 221 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 ACTR2P61160 394 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 ROR1Q01973 937 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 RNF43Q68DV7 783 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 ARHGAP24Q8N264 748 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 RBM15BQ8NDT2 890 aaKnown RBP15.16■□□□□ 0.02
PTPN9-201ENST00000306726 OXNAD1Q96HP4 312 aaPredicted RBP15.16■□□□□ 0.02
PTPN9-201ENST00000306726 TBC1D22BQ9NU19 505 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 PFDN1O60925 122 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 PROCP04070 461 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 ICAM1P05362 532 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 RFX1P22670 979 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 SP100P23497 879 aaPredicted RBP15.16■□□□□ 0.02
PTPN9-201ENST00000306726 ZNF568Q3ZCX4 644 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 TNS4Q8IZW8 715 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 TFAP2BQ92481 460 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 TRIM11Q96F44 468 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 SCYL1Q96KG9 808 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 PDCD2LQ9BRP1 358 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 UBP1Q9NZI7 540 aa15.16■□□□□ 0.02
PTPN9-201ENST00000306726 ATP9BO43861 1147 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 CREB3O43889 395 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 SLC10A3P09131 477 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 CCNFP41002 786 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 ZC3H12AQ5D1E8 599 aaKnown RBP15.15■□□□□ 0.02
PTPN9-201ENST00000306726 GLRA4Q5JXX5 417 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 CST9Q5W186 159 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 RIPOR1Q6ZS17 1223 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 CDHR3Q6ZTQ4 885 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 ZNF784Q8NCA9 323 aaPredicted RBP15.15■□□□□ 0.02
PTPN9-201ENST00000306726 ASAP3Q8TDY4 903 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 TTC25Q96NG3 672 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 DNAJC16Q9Y2G8 782 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 ATP5HO75947 161 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 KRT37O76014 449 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 ZNF157P51786 506 aaPredicted RBP15.15■□□□□ 0.02
PTPN9-201ENST00000306726 PGM5Q15124 567 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 FAM43BQ6ZT52 329 aaPredicted RBP15.15■□□□□ 0.02
PTPN9-201ENST00000306726 RAPH1Q70E73 1250 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 SAPCD2Q86UD0 394 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 RNF135Q8IUD6 432 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 DNAAF3Q8N9W5 541 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 EXD1Q8NHP7 514 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 OLIG1Q8TAK6 271 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 MORC4Q8TE76 937 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 C10orf82Q8WW14 230 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 PARK7Q99497 189 aaKnown RBP15.15■□□□□ 0.02
PTPN9-201ENST00000306726 LPIN3Q9BQK8 851 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 SYT11Q9BT88 431 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 SLC38A10Q9HBR0 1119 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 CYP26B1Q9NR63 512 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 ADAMTS5Q9UNA0 930 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 TCRBV9S1A1TA0A576 114 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 SRRM3A6NNA2 597 aaPredicted RBP15.15■□□□□ 0.02
PTPN9-201ENST00000306726 PSAPP07602 524 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 IL1R2P27930 398 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 GTF2BQ00403 316 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 CENPCQ03188 943 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 OLIG2Q13516 323 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 RIPK1Q13546 671 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 GALNTL6Q49A17 601 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 TRMT10BQ6PF06 316 aaKnown RBP15.15■□□□□ 0.02
PTPN9-201ENST00000306726 RASAL3Q86YV0 1011 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 SCUBE1Q8IWY4 988 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 PPIL6Q8IXY8 311 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 C12orf29Q8N999 325 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms