RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 A1CFQ9NQ94 594 aaKnown RBP16.91■□□□□ 0.3
BRD3-201ENST00000303407 NKRFO15226 690 aaKnown RBP eCLIP16.91■□□□□ 0.38e-7■■■□□ 18
BRD3-201ENST00000303407 ALDH1A1P00352 501 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 CNTFP26441 200 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 IFNA8P32881 189 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 DYNC1I2Q13409 638 aaKnown RBP16.91■□□□□ 0.3
BRD3-201ENST00000303407 TIGD7Q6NT04 549 aaPredicted RBP16.91■□□□□ 0.3
BRD3-201ENST00000303407 CCDC60Q8IWA6 550 aaPredicted RBP16.91■□□□□ 0.3
BRD3-201ENST00000303407 IL1RL2Q9HB29 575 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 VIRMAQ69YN4 1812 aaKnown RBP16.91■□□□□ 0.3
BRD3-201ENST00000303407 THP07101 528 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 NUDT2P50583 147 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 BMPR2Q13873 1038 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 STRA8Q7Z7C7 330 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 EPS8L1Q8TE68 723 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 HASPINQ8TF76 798 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 LATS2Q9NRM7 1088 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 MRGBPQ9NV56 204 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 NCANO14594 1321 aa16.91■□□□□ 0.3
BRD3-201ENST00000303407 MAP2K7O14733 419 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 CDH8P55286 799 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 GTF2BQ00403 316 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 NBPF20Q3BBV1 942 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 MTDHQ86UE4 582 aaKnown RBP16.9■□□□□ 0.3
BRD3-201ENST00000303407 SPATA20Q8TB22 786 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 DNPEPQ9ULA0 475 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 SH3BP1Q9Y3L3 701 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 BTNL10A8MVZ5 291 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 ACKR2O00590 384 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 IFI35P80217 286 aaPredicted RBP16.9■□□□□ 0.3
BRD3-201ENST00000303407 RNF180Q86T96 592 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 TTC30BQ8N4P2 665 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 SNX31Q8N9S9 440 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.9■□□□□ 0.3
BRD3-201ENST00000303407 BLOC1S5Q8TDH9 187 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 GPR63Q9BZJ6 419 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 PORCNQ9H237 461 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 ZNF197O14709 1029 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 TIMM44O43615 452 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 CHRM3P20309 590 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 AKAP5P24588 427 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 SOX11P35716 441 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 PAN2Q504Q3 1202 aaKnown RBP16.9■□□□□ 0.3
BRD3-201ENST00000303407 TTMPQ5BVD1 217 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 AGAP9Q5VTM2 703 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 LAYNQ6UX15 382 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 ZNF662Q6ZS27 426 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 GALNT4Q8N4A0 578 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 CHST7Q9NS84 486 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 UBIAD1Q9Y5Z9 338 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 PDHXO00330 501 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 CYP1A2P05177 515 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 PAEPP09466 180 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 PECAM1P16284 738 aaPredicted RBP16.9■□□□□ 0.3
BRD3-201ENST00000303407 VHLP40337 213 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 C6orf10Q5SRN2 563 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 PTF1AQ7RTS3 328 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 WNK4Q96J92 1243 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 RPRD1AQ96P16 312 aaPredicted RBP16.9■□□□□ 0.3
BRD3-201ENST00000303407 FICDQ9BVA6 458 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 SPATA31C1P0DKV0 1188 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 SERPINB5P36952 375 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 APOL2Q9BQE5 337 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 APOL5Q9BWW9 433 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 DNAJC16Q9Y2G8 782 aa16.9■□□□□ 0.3
BRD3-201ENST00000303407 PTPRAP18433 802 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 ALDH1A3P47895 512 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 AQP5P55064 265 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 KATNAL2Q8IYT4 538 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 GLIS2Q9BZE0 524 aaPredicted RBP16.89■□□□□ 0.29
BRD3-201ENST00000303407 ASCC2Q9H1I8 757 aaPredicted RBP16.89■□□□□ 0.29
BRD3-201ENST00000303407 DLG5Q8TDM6 1919 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 ELK3P41970 407 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 KCNK10P57789 538 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 NFIL3Q16649 462 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 FAM117BQ6P1L5 589 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 PURBQ96QR8 312 aaKnown RBP16.89■□□□□ 0.29
BRD3-201ENST00000303407 UBE2OQ9C0C9 1292 aaKnown RBP16.89■□□□□ 0.29
BRD3-201ENST00000303407 BATF3Q9NR55 127 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 DDX43Q9NXZ2 648 aaKnown RBP16.89■□□□□ 0.29
BRD3-201ENST00000303407 CASTOR2A6NHX0 329 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 ADM5C9JUS6 153 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 UBOX5O94941 541 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 GLRBP48167 497 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 IFNEQ86WN2 208 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 RXFP1Q9HBX9 757 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 CPA4Q9UI42 421 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 PCDHGB4Q9UN71 923 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 BCL9LQ86UU0 1499 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 RCN1Q15293 331 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 SPDYCQ5MJ68 293 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 DNAJB3Q8WWF6 145 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 COLEC11Q9BWP8 271 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 ACP6Q9NPH0 428 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 GID8Q9NWU2 228 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 SCHIP1Q9P0W5 487 aaPredicted RBP16.89■□□□□ 0.29
BRD3-201ENST00000303407 DSEQ9UL01 958 aa16.89■□□□□ 0.29
BRD3-201ENST00000303407 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
BRD3-201ENST00000303407 UBTFL6P0CB48 400 aaPredicted RBP16.88■□□□□ 0.29
BRD3-201ENST00000303407 TM4SF1P30408 202 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms