RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 TTC8Q8TAM2 541 aa11.89□□□□□ -0.51
CLCC1-201ENST00000302500 FBXO32Q969P5 355 aa11.89□□□□□ -0.51
CLCC1-201ENST00000302500 SLITRK1Q96PX8 696 aa11.89□□□□□ -0.51
CLCC1-201ENST00000302500 KLF16Q9BXK1 252 aaPredicted RBP11.89□□□□□ -0.51
CLCC1-201ENST00000302500 TRPC7Q9HCX4 862 aa11.89□□□□□ -0.51
CLCC1-201ENST00000302500 SIX2Q9NPC8 291 aa11.89□□□□□ -0.51
CLCC1-201ENST00000302500 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLCC1-201ENST00000302500 EHD2Q9NZN4 543 aa11.89□□□□□ -0.51
CLCC1-201ENST00000302500 CPQQ9Y646 472 aa11.89□□□□□ -0.51
CLCC1-201ENST00000302500 PLXND1Q9Y4D7 1925 aa11.89□□□□□ -0.51
CLCC1-201ENST00000302500 ATP8B3O60423 1300 aa11.89□□□□□ -0.51
CLCC1-201ENST00000302500 A0A0A0MRY4 1105 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 BECN2A8MW95 431 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 GFRA2O00451 464 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 GNA14O95837 355 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 TBX18O95935 607 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 CYP17A1P05093 508 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 APBA1Q02410 837 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 PON2Q15165 354 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 RHBDF2Q6PJF5 856 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 Q6ZNB5 142 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 PIGZQ86VD9 579 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 SFTPA1Q8IWL2 248 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 ETFBKMTQ8IXQ9 262 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 SCML4Q8N228 414 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 MLKLQ8NB16 471 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 EHBP1Q8NDI1 1231 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 SLC35F5Q8WV83 523 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 CNOT6LQ96LI5 555 aaKnown RBP11.88□□□□□ -0.51
CLCC1-201ENST00000302500 IRF2BPLQ9H1B7 796 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 HSD3B7Q9H2F3 369 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 LMAN1LQ9HAT1 526 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 AJAP1Q9UKB5 411 aaPredicted RBP11.88□□□□□ -0.51
CLCC1-201ENST00000302500 TSPAN16Q9UKR8 245 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 HCN2Q9UL51 889 aa11.88□□□□□ -0.51
CLCC1-201ENST00000302500 NDRG2Q9UN36 371 aaKnown RBP11.88□□□□□ -0.51
CLCC1-201ENST00000302500 MRPS17Q9Y2R5 130 aaKnown RBP11.88□□□□□ -0.51
CLCC1-201ENST00000302500 CHURC1-FNTBB4DL54 471 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 DPYSL4O14531 572 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 TLR5O60602 858 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 CALCAP01258 141 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 PAEPP09466 180 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 HOXA6P31267 233 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 ANP32AP39687 249 aaKnown RBP11.87□□□□□ -0.51
CLCC1-201ENST00000302500 PLA2G4AP47712 749 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 PDE6CP51160 858 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 SATB1Q01826 763 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 PDE4CQ08493 712 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 DMWDQ09019 674 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 HECTD3Q5T447 861 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 LCLAT1Q6UWP7 414 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 HTR3DQ70Z44 454 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 C12orf40Q86WS4 652 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 YAF2Q8IY57 180 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 SPEM1Q8N4L4 309 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 CSGALNACT1Q8TDX6 532 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 ATOH1Q92858 354 aaPredicted RBP11.87□□□□□ -0.51
CLCC1-201ENST00000302500 MED10Q9BTT4 135 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 FBXO44Q9H4M3 255 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 THG1LQ9NWX6 298 aaKnown RBP11.87□□□□□ -0.51
CLCC1-201ENST00000302500 DUS2Q9NX74 493 aaKnown RBP11.87□□□□□ -0.51
CLCC1-201ENST00000302500 CLIC5Q9NZA1 410 aa11.87□□□□□ -0.51
CLCC1-201ENST00000302500 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCC1-201ENST00000302500 TNRC6BQ9UPQ9 1833 aaKnown RBP11.87□□□□□ -0.51
CLCC1-201ENST00000302500 A0A1W2PQH9 124 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 E2F8A0AVK6 867 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 GTPBP10A4D1E9 387 aaKnown RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 K7EQS6 105 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 XPO1O14980 1071 aaKnown RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 EGFP01133 1207 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 AFPP02771 609 aaKnown RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 KLKB1P03952 638 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 TBXAS1P24557 533 aaPredicted RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 ERCC5P28715 1186 aaPredicted RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 GALK1P51570 392 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 LRMPQ12912 555 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 TRIM65Q6PJ69 517 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 TSSK4Q6SA08 328 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 FAM217AQ8IXS0 508 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 SYNPOQ8N3V7 929 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 KCTD13Q8WZ19 329 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 ATP2A3Q93084 1043 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 INTS2Q9H0H0 1204 aaKnown RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 CD248Q9HCU0 757 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 SMPD4Q9NXE4 827 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 CFAP97Q9P2B7 532 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 CYTH4Q9UIA0 394 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 R4GN57 208 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 SCAMP3O14828 347 aaKnown RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 HOXC11O43248 304 aaPredicted RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 FYNP06241 537 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 VDRP11473 427 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 SLC9A1P19634 815 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 PON1P27169 355 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 KPNA1P52294 538 aaPredicted RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 KCNMA1Q12791 1236 aa11.86□□□□□ -0.51
CLCC1-201ENST00000302500 IFRD2Q12894 506 aaPredicted RBP11.86□□□□□ -0.51
CLCC1-201ENST00000302500 DHCR24Q15392 516 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms