RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 LMO2P25791 158 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 AVPR1AP37288 418 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 SLC11A2P49281 568 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 LIG3P49916 1009 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 MARSP56192 900 aaKnown RBP10.57□□□□□ -0.72
GABRB3-201ENST00000299267 TMEM139Q8IV31 216 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 AFAP1L2Q8N4X5 818 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 SLAIN1Q8ND83 568 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 MAML1Q92585 1016 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 ZIM3Q96PE6 472 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 CPXM1Q96SM3 734 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 FZD8Q9H461 694 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 A0A0A6YYK5 440 aaPredicted RBP10.57□□□□□ -0.72
GABRB3-201ENST00000299267 A0A0G2JND7 137 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 MAPK13O15264 365 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 AMHP03971 560 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 RPL17P18621 184 aaKnown RBP10.57□□□□□ -0.72
GABRB3-201ENST00000299267 DUSP4Q13115 394 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 PTPN20Q4JDL3 420 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF697Q5TEC3 545 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 SLC39A4Q6P5W5 647 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 LRRC8DQ7L1W4 858 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 CREG2Q8IUH2 290 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 EXD1Q8NHP7 514 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF296Q8WUU4 475 aaPredicted RBP10.57□□□□□ -0.72
GABRB3-201ENST00000299267 KAT2BQ92831 832 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 MYLPFQ96A32 169 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 ELOVL4Q9GZR5 314 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 TKTL2Q9H0I9 626 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 DPEP3Q9H4B8 488 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 CCDC88AQ3V6T2 1871 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 PPEF2O14830 753 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 USP12O75317 370 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 PIAS1O75925 651 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 F9P00740 461 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 RAD51Q06609 339 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 SPARCL1Q14515 664 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 TAPT1Q6NXT6 567 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 NPNTQ6UXI9 565 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 SLC24A5Q71RS6 500 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 APTXQ7Z2E3 356 aaKnown RBP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ATP6V0D2Q8N8Y2 350 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 TFAP2BQ92481 460 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF669Q96BR6 464 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 PAK5Q9P286 719 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ZMYND8Q9ULU4 1186 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 A0A1B0GUA9 196 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ARHGAP42A6NI28 874 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 SELPP16109 830 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 PAMP19021 973 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 APLP1P51693 650 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 EPHB3P54753 998 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 MAP3K10Q02779 954 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF177Q13360 481 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 TAF5Q15542 800 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 FAM133BQ5BKY9 247 aaKnown RBP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ERMARDQ5T6L9 678 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 RASSF3Q86WH2 238 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 PLEKHO2Q8TD55 490 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 TTC1Q99614 292 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ST6GALNAC4Q9H4F1 302 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 MORF4L1Q9UBU8 362 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ARL5CA6NH57 179 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 F5H5T6 163 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ETS1P14921 441 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 TPH1P17752 444 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 TUSC3Q13454 348 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 HABP4Q5JVS0 413 aaKnown RBP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 MSL3Q8N5Y2 521 aaKnown RBP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 CDC26Q8NHZ8 85 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 BLOC1S5Q8TDH9 187 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ALG3Q92685 438 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 CIPCQ9C0C6 399 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ISCUQ9H1K1 167 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 SYN1P17600 705 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 CCR1P32246 355 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 TUBP50607 506 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 CSE1LP55060 971 aaKnown RBP10.56□□□□□ -0.72
GABRB3-201ENST00000299267 LILRA4P59901 499 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 ASPHQ12797 758 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 MROH9Q5TGP6 573 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 TMEM130Q8N3G9 435 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 PITPNM3Q9BZ71 974 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 SFMBT1Q9UHJ3 866 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 PCDHA3Q9Y5H8 950 aa10.56□□□□□ -0.72
GABRB3-201ENST00000299267 MARF1Q9Y4F3 1742 aaKnown RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 MYADML2A6NDP7 307 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 PJA2O43164 708 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 HCRTO43612 131 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 TRUB2O95900 331 aaKnown RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 TBX4P57082 545 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 TAS2R40P59535 323 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 TAF1BQ53T94 588 aaPredicted RBP10.55□□□□□ -0.72
GABRB3-201ENST00000299267 TPGS1Q6ZTW0 290 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 C16orf59Q7L2K0 433 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 PPP1R36Q96LQ0 422 aa10.55□□□□□ -0.72
GABRB3-201ENST00000299267 NT5MQ9NPB1 228 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms