RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 A0A1W2PPM1 405 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 SIGLEC16A6NMB1 481 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 ASAP2O43150 1006 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 SMNDC1O75940 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 RECQL4O94761 1208 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 IL18RAPO95256 599 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 CD151P48509 253 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 NCALDP61601 193 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 YWHAGP61981 247 aaKnown RBP eCLIP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 IFRD2Q12894 506 aaPredicted RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 HIF1AQ16665 826 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 CA9Q16790 459 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 FNBP1LQ5T0N5 605 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 TRNP1Q6NT89 227 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 USP50Q70EL3 339 aaPredicted RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 PALM2Q8IXS6 379 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 UBR7Q8N806 425 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 TINF2Q9BSI4 451 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 TMPRSS4Q9NRS4 437 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 DLGAP2Q9P1A6 1054 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 HESX1Q9UBX0 185 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 CNTN6Q9UQ52 1028 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 MYO18AQ92614 2054 aaKnown RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 CLDN5O00501 218 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 DNALI1O14645 258 aaPredicted RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 MCF2LO15068 1137 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 TREHO43280 583 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 MMP3P08254 477 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 CA4P22748 312 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 TARSP26639 723 aaKnown RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 KLRC2P26717 231 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 GPD2P43304 727 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 SLC26A2P50443 739 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 DNAJC3Q13217 504 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 DGKDQ16760 1214 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 ALLCQ8N6M5 410 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 PPTC7Q8NI37 304 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 FAM172AQ8WUF8 416 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 TMEM40Q8WWA1 233 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 ATXN2LQ8WWM7 1075 aaKnown RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 MAML3Q96JK9 1138 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 ZFP42Q96MM3 310 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 TGS1Q96RS0 853 aaKnown RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 PTPN18Q99952 460 aa10.53□□□□□ -0.72
FOXN4-201ENST00000299162 STMN4Q9H169 189 aaPredicted RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 MMADHCQ9H3L0 296 aaPredicted RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 DHX35Q9H5Z1 703 aaKnown RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 PAPOLBQ9NRJ5 636 aaKnown RBP10.53□□□□□ -0.72
FOXN4-201ENST00000299162 MAGEB2O15479 319 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 KCNN4O15554 427 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 ATP6V1G1O75348 118 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 SUN1O94901 812 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 LINGO3P0C6S8 592 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 SETSIPP0DME0 302 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 RPL22P35268 128 aaKnown RBP10.52□□□□□ -0.72
FOXN4-201ENST00000299162 TUBP50607 506 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 SLC25A11Q02978 314 aaKnown RBP10.52□□□□□ -0.72
FOXN4-201ENST00000299162 SEPT7Q16181 437 aaKnown RBP10.52□□□□□ -0.72
FOXN4-201ENST00000299162 MUM1Q2TAK8 710 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 ZNF792Q3KQV3 632 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 MARCH8Q5T0T0 291 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 TWF2Q6IBS0 349 aaKnown RBP10.52□□□□□ -0.72
FOXN4-201ENST00000299162 C3orf62Q6ZUJ4 267 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 RBM12BQ8IXT5 1001 aaKnown RBP10.52□□□□□ -0.72
FOXN4-201ENST00000299162 ADAM32Q8TC27 787 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 P3H4Q92791 437 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 ZFATQ9P243 1243 aa10.52□□□□□ -0.72
FOXN4-201ENST00000299162 NKX1-2Q9UD57 310 aaPredicted RBP10.52□□□□□ -0.72
FOXN4-201ENST00000299162 XPO7Q9UIA9 1087 aaKnown RBP10.52□□□□□ -0.72
FOXN4-201ENST00000299162 BARX2Q9UMQ3 279 aaPredicted RBP10.52□□□□□ -0.72
FOXN4-201ENST00000299162 BRCA1P38398 1863 aaKnown RBP10.52□□□□□ -0.73
FOXN4-201ENST00000299162 MEIS3P2A8K0S8 358 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 HMGCRP04035 888 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 KRT7P08729 469 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 MCF2P10911 925 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 ABL2P42684 1182 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 TMEM154Q6P9G4 183 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 VSTM1Q6UX27 236 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 MAMDC4Q6UXC1 1216 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 TTC30AQ86WT1 665 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 EXOC8Q8IYI6 725 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 TEKT4Q8WW24 435 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 NAF1Q96HR8 494 aaKnown RBP10.52□□□□□ -0.73
FOXN4-201ENST00000299162 SLCO1B3Q9NPD5 702 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 RAB6BQ9NRW1 208 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 SEPT10Q9P0V9 454 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 APRTP07741 180 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 GPD1P21695 349 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 RNF220Q5VTB9 566 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 CENPUQ71F23 418 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 FAM131BQ86XD5 332 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 FBXO36Q8NEA4 188 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 FAM81AQ8TBF8 368 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 CCDC110Q8TBZ0 833 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 DTX3LQ8TDB6 740 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 RRAGCQ9HB90 399 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 BATF3Q9NR55 127 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 HAO1Q9UJM8 370 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 MAD1L1Q9Y6D9 718 aa10.52□□□□□ -0.73
FOXN4-201ENST00000299162 TMEM63AO94886 807 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms