RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 TTC13Q8NBP0 860 aa14.03□□□□□ -0.16
RPUSD4-201ENST00000298317 RSAD2Q8WXG1 361 aa14.03□□□□□ -0.16
RPUSD4-201ENST00000298317 ZNF516Q92618 1163 aa14.03□□□□□ -0.16
RPUSD4-201ENST00000298317 DCUN1D1Q96GG9 259 aa14.03□□□□□ -0.16
RPUSD4-201ENST00000298317 CORO1BQ9BR76 489 aa14.03□□□□□ -0.16
RPUSD4-201ENST00000298317 GRIP2Q9C0E4 1043 aa14.03□□□□□ -0.16
RPUSD4-201ENST00000298317 STN1Q9H668 368 aaKnown RBP14.03□□□□□ -0.16
RPUSD4-201ENST00000298317 EHMT1Q9H9B1 1298 aa14.03□□□□□ -0.16
RPUSD4-201ENST00000298317 PCDH18Q9HCL0 1135 aa14.03□□□□□ -0.16
RPUSD4-201ENST00000298317 MYH9P35579 1960 aaKnown RBP14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 RFPL1O75677 317 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 KRT37O76014 449 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 KLHL2O95198 593 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 BPGMP07738 259 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 SNRPAP09012 282 aaKnown RBP14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 SERPINB6P35237 376 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 APOFQ13790 326 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 BRDTQ58F21 947 aaPredicted RBP14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 USP6NLQ92738 828 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 APBB2Q92870 758 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 KCNN1Q92952 543 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 CCDC124Q96CT7 223 aaKnown RBP14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 MCEEQ96PE7 176 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 KIFC3Q9BVG8 833 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 PAIP2BQ9ULR5 123 aaKnown RBP14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 TTLL3Q9Y4R7 772 aa14.02□□□□□ -0.16
RPUSD4-201ENST00000298317 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 CCDC160A6NGH7 325 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 BIRC5O15392 142 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 LYPLA2O95372 231 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 PROCP04070 461 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 PCSK6P29122 969 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 ALDH1A3P47895 512 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 YWHAGP61981 247 aaKnown RBP eCLIP14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 DYNLT1P63172 113 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 PHEXP78562 749 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 BASP1P80723 227 aaKnown RBP14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 CREB5Q02930 508 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 APOBEC3HQ6NTF7 200 aaKnown RBP14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 TATDN1Q6P1N9 297 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 DENND5BQ6ZUT9 1274 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 BBS12Q6ZW61 710 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 CCDC80Q76M96 950 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 ARCQ7LC44 396 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 MAP7D3Q8IWC1 876 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 UNC45BQ8IWX7 931 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 NUP93Q8N1F7 819 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 POU5F2Q8N7G0 328 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 SH2D3AQ9BRG2 576 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 Q9H521 79 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 XAB2Q9HCS7 855 aaKnown RBP14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 THAP1Q9NVV9 213 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 RAB26Q9ULW5 256 aa14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 BARX2Q9UMQ3 279 aaPredicted RBP14.02□□□□□ -0.17
RPUSD4-201ENST00000298317 ARHGAP10A1A4S6 786 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 TNFAIP8O95379 198 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 SLC5A2P31639 672 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 SERPINB8P50452 374 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 GALK1P51570 392 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 CBLBQ13191 982 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 WDR44Q5JSH3 913 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 SPOPLQ6IQ16 392 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 POLNQ7Z5Q5 900 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 GPD1LQ8N335 351 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 NIPA2Q8N8Q9 360 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 TEKT1Q969V4 418 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 ZNF778Q96MU6 729 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 MXRA8Q9BRK3 442 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 BRD8Q9H0E9 1235 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 C6orf203Q9P0P8 240 aaPredicted RBP14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 BTBD7Q9P203 1132 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 PCDHGB4Q9UN71 923 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 PCDHGB5Q9Y5G0 923 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 SLX4Q8IY92 1834 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 TMEM150BA6NC51 233 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 GNPATO15228 680 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 CST8O60676 142 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 HLA-DRAP01903 254 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 HNRNPCP07910 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 YWHABP31946 246 aaKnown RBP14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 QARSP47897 775 aaKnown RBP14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 NPTX2P47972 431 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 CLDN10P78369 228 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 MYBPC1Q00872 1141 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 STX3Q13277 289 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 CUL2Q13617 745 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 PIGHQ14442 188 aaPredicted RBP14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 ZACNQ401N2 412 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 CCDC92Q53HC0 331 aaPredicted RBP14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 TMEM270Q6UE05 265 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 FBXW8Q8N3Y1 598 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 PPM1NQ8N819 430 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 ABTB1Q969K4 478 aaPredicted RBP14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 GFM2Q969S9 779 aaKnown RBP14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 PSMD13Q9UNM6 376 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 AGTPBP1Q9UPW5 1226 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 CNTN6Q9UQ52 1028 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 PCDHB4Q9Y5E5 795 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 LTBP1Q14766 1721 aa14.01□□□□□ -0.17
RPUSD4-201ENST00000298317 SIN3BO75182 1162 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms