RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 GRIA1P42261 906 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 GRM1Q13255 1194 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 PRKD1Q15139 912 aaPredicted RBP25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 TRMT10BQ6PF06 316 aaKnown RBP25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 GADL1Q6ZQY3 521 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 SH2D5Q6ZV89 423 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 MPP5Q8N3R9 675 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 CHST13Q8NET6 341 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 FNIP1Q8TF40 1166 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 SPATA33Q96N06 139 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 BCO2Q9BYV7 579 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 TRIM6Q9C030 488 aaPredicted RBP25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 USP29Q9HBJ7 922 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 SSU72Q9NP77 194 aaKnown RBP25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 SLC17A6Q9P2U8 582 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 MAD1L1Q9Y6D9 718 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 PROZP22891 400 aa25.39■■□□□ 1.65
SPTSSA-201ENST00000298130 NDST1P52848 882 aa25.39■■□□□ 1.65
SPTSSA-201ENST00000298130 ZCCHC23Q6ZST2 131 aa25.39■■□□□ 1.65
SPTSSA-201ENST00000298130 PTCD3Q96EY7 689 aaKnown RBP25.39■■□□□ 1.65
SPTSSA-201ENST00000298130 MCRS1Q96EZ8 462 aa25.39■■□□□ 1.65
SPTSSA-201ENST00000298130 VPS33BQ9H267 617 aa25.39■■□□□ 1.65
SPTSSA-201ENST00000298130 PPCSQ9HAB8 311 aa25.39■■□□□ 1.65
SPTSSA-201ENST00000298130 PLAC1Q9HBJ0 212 aa25.39■■□□□ 1.65
SPTSSA-201ENST00000298130 ASNSD1Q9NWL6 643 aa25.39■■□□□ 1.65
SPTSSA-201ENST00000298130 ZC3H7BQ9UGR2 993 aaKnown RBP25.39■■□□□ 1.65
SPTSSA-201ENST00000298130 GSC2O15499 205 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 PRPSAP2O60256 369 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 GPD1P21695 349 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 RCN1Q15293 331 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 ACSBG2Q5FVE4 666 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 LBX2Q6XYB7 198 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 UNC5BQ8IZJ1 945 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 VPS52Q8N1B4 723 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 PLD5Q8N7P1 536 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 B3GNT5Q9BYG0 378 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 RNPEPQ9H4A4 650 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 PDGFCQ9NRA1 345 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 FAM49BQ9NUQ9 324 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 TSPAN16Q9UKR8 245 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 IL4RP24394 825 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 MROH9Q5TGP6 573 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 EP400NLQ6ZTU2 488 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 SCUBE3Q8IX30 993 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 NSL1Q96IY1 281 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 BTBD10Q9BSF8 475 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 OSBPL1AQ9BXW6 950 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 TAS2R1Q9NYW7 299 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 TTLL3Q9Y4R7 772 aa25.38■■□□□ 1.65
SPTSSA-201ENST00000298130 FCHO1O14526 889 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 ZNF143P52747 638 aaPredicted RBP25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 CDK16Q00536 496 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 MBTD1Q05BQ5 628 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 RCN2Q14257 317 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 KCNN1Q92952 543 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 MIS12Q9H081 205 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 DHRS4L1P0CG22 281 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 SURF1Q15526 300 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 CCDC6Q16204 474 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 ARID3BQ8IVW6 561 aaPredicted RBP25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 MCUR1Q96AQ8 359 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 HPDLQ96IR7 371 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 RNF157Q96PX1 679 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 FZD8Q9H461 694 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 PCMTD2Q9NV79 361 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 DOCK1Q14185 1865 aa25.37■■□□□ 1.65
SPTSSA-201ENST00000298130 A0A087WZ62 844 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 TRAFD1O14545 582 aaPredicted RBP25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 CCDC22O60826 627 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 SMNDC1O75940 238 aaKnown RBP eCLIP25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 ESRRAP11474 423 aaPredicted RBP25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 TUBP50607 506 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 ZNF772Q68DY9 489 aaPredicted RBP25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 CAND1Q86VP6 1230 aaKnown RBP25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 SKA1Q96BD8 255 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 ALKBH8Q96BT7 664 aaKnown RBP25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 FDXACB1Q9BRP7 624 aaPredicted RBP25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 SPATC1LQ9H0A9 340 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 C2CD4BA6NLJ0 364 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 HCRTO43612 131 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 ZBED1O96006 694 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 ENO1P06733 434 aaKnown RBP25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 CSH1P0DML2 217 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 CSH2P0DML3 217 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 BCAR1P56945 870 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 TMPRSS15P98073 1019 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 VGLL4Q14135 290 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 HSF5Q4G112 596 aaPredicted RBP25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 ANO7Q6IWH7 933 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 PQLC3Q8N755 202 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 C20orf27Q9GZN8 174 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 WDR35Q9P2L0 1181 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 FETUBQ9UGM5 382 aa25.36■■□□□ 1.65
SPTSSA-201ENST00000298130 VTNP04004 478 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 RPS12P25398 132 aaKnown RBP25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 MRPS5P82675 430 aaKnown RBP25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 BST1Q10588 318 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 NBPF20Q3BBV1 942 aa25.35■■□□□ 1.65
SPTSSA-201ENST00000298130 CCDC14Q49A88 953 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms