RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 C9IYK1 514 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 PITPNM1O00562 1244 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 TNRC18O15417 2968 aaPredicted RBP6.96□□□□□ -1.29
TMC1-201ENST00000297784 B4GALT3O60512 393 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 STAU1O95793 577 aaKnown RBP6.96□□□□□ -1.29
TMC1-201ENST00000297784 UNGP13051 313 aaPredicted RBP6.96□□□□□ -1.29
TMC1-201ENST00000297784 SELPP16109 830 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 CD58P19256 250 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 YARSP54577 528 aaKnown RBP6.96□□□□□ -1.29
TMC1-201ENST00000297784 FAM189BP81408 668 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 OCRLQ01968 901 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 TRPC3Q13507 836 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 SLC29A2Q14542 456 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 TRIM60Q495X7 471 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 PLEKHG4Q58EX7 1191 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 LIMS2Q7Z4I7 341 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 EXOC3L1Q86VI1 746 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 C3orf58Q8NDZ4 430 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 TFAP2BQ92481 460 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 SCLYQ96I15 445 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 NIF3L1Q9GZT8 377 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 KLHL14Q9P2G3 628 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 ZMYND8Q9ULU4 1186 aaPredicted RBP6.96□□□□□ -1.29
TMC1-201ENST00000297784 UNC80Q8N2C7 3258 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 C5orf42Q9H799 3197 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 RASGRF2O14827 1237 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 ZSCAN9O15535 394 aaPredicted RBP6.96□□□□□ -1.3
TMC1-201ENST00000297784 CREB3O43889 395 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 RARGP13631 454 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 TBXAS1P24557 533 aaPredicted RBP6.96□□□□□ -1.3
TMC1-201ENST00000297784 ATP5DP30049 168 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 ATICP31939 592 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 SSTR3P32745 418 aaPredicted RBP6.96□□□□□ -1.3
TMC1-201ENST00000297784 RANBP1P43487 201 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 IFNAR2P48551 515 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 PTDSS1P48651 473 aaKnown RBP6.96□□□□□ -1.3
TMC1-201ENST00000297784 DR1Q01658 176 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 CDR2Q01850 454 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 ORC1Q13415 861 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 SOWAHAQ2M3V2 549 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 ZNF394Q53GI3 561 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 HHATQ5VTY9 493 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 CD300LGQ6UXG3 332 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 SCARA5Q6ZMJ2 495 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 FAM13CQ8NE31 585 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 PTPRN2Q92932 1015 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 RUNDC3BQ96NL0 473 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 TRIM51Q9BSJ1 452 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 SEZ6LQ9BYH1 1024 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 TSPYL2Q9H2G4 693 aaPredicted RBP6.96□□□□□ -1.3
TMC1-201ENST00000297784 TLE6Q9H808 572 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 ETNK1Q9HBU6 452 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 DLGAP2Q9P1A6 1054 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 PDP2Q9P2J9 529 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 RASAL2Q9UJF2 1139 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 TMCO1Q9UM00 188 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 TRIM33Q9UPN9 1127 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 COL4A6Q14031 1691 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 PTPRSQ13332 1948 aa6.96□□□□□ -1.3
TMC1-201ENST00000297784 LTBP2Q14767 1821 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 RIPK2O43353 540 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 HCRTO43612 131 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 KRT5P13647 590 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 CLCNKBP51801 687 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 SH3BGRP55822 239 aaPredicted RBP6.95□□□□□ -1.3
TMC1-201ENST00000297784 RBP5P82980 135 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 TLE2Q04725 743 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 MGAT5Q09328 741 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 PKN2Q16513 984 aaKnown RBP6.95□□□□□ -1.3
TMC1-201ENST00000297784 LRRC26Q2I0M4 334 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 FOXB2Q5VYV0 432 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 VSTM1Q6UX27 236 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 ECHDC2Q86YB7 292 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 WDTC1Q8N5D0 677 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 PAWRQ96IZ0 340 aaKnown RBP6.95□□□□□ -1.3
TMC1-201ENST00000297784 RMDN2Q96LZ7 410 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 MAGEB18Q96M61 343 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 TOX2Q96NM4 488 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 SERPINB12Q96P63 405 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 PLEKHG4BQ96PX9 1271 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 NUDCD1Q96RS6 583 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 CARD9Q9H257 536 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 DCLRE1BQ9H816 532 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 GRHL1Q9NZI5 618 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 ATXN10Q9UBB4 475 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 MTRF1LQ9UGC7 380 aaKnown RBP6.95□□□□□ -1.3
TMC1-201ENST00000297784 PCDHB4Q9Y5E5 795 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 NCANO14594 1321 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 TLDC2A0PJX2 215 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 F8W810 466 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 ENPP3O14638 875 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 CILPO75339 1184 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 CYP1A1P04798 512 aaPredicted RBP6.95□□□□□ -1.3
TMC1-201ENST00000297784 PDHA1P08559 390 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 GM2AP17900 193 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 CYP3A5P20815 502 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 LRPAP1P30533 357 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 VHLP40337 213 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 GALCP54803 685 aa6.95□□□□□ -1.3
TMC1-201ENST00000297784 LILRA4P59901 499 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms