RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 VAC14Q08AM6 782 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 MAPK7Q13164 816 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ANO4Q32M45 955 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 TOM1L2Q6ZVM7 507 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ALLCQ8N6M5 410 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 CKAP2Q8WWK9 683 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 THRSPQ92748 146 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 YTHDF1Q9BYJ9 559 aaKnown RBP4.99□□□□□ -1.61
CSMD3-201ENST00000297405 ST3GAL5Q9UNP4 418 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PCDHB4Q9Y5E5 795 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PCDHGA11Q9Y5H2 935 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 PEX16Q9Y5Y5 336 aa4.99□□□□□ -1.61
CSMD3-201ENST00000297405 RTN2O75298 545 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 RPL3P39023 403 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ALFQ53S48 1182 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SPDYAQ5MJ70 313 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ZYG11AQ6WRX3 759 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 CCDC71Q8IV32 467 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ALDH16A1Q8IZ83 802 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 MCPH1Q8NEM0 835 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 RANBP3Q9H6Z4 567 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 EXOSC4Q9NPD3 245 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ERGIC3Q9Y282 383 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ADCY10Q96PN6 1610 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 A0A0A6YYK5 440 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SLC22A1O15245 554 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ITGB3P05106 788 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PDGFRAP16234 1089 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PSMA2P25787 234 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 GSSP48637 474 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 NCALDP61601 193 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 CYP4F8P98187 520 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SLC7A5Q01650 507 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SIX5Q8N196 739 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 GPRASP2Q96D09 838 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 FAM111AQ96PZ2 611 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 OLA1Q9NTK5 396 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 QPCTLQ9NXS2 382 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SPATA7Q9P0W8 599 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 LOC100653049A0A140TA62 436 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 UNC5CO95185 931 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SERPINF2P08697 491 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 BNIP2Q12982 314 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 CLEC16AQ2KHT3 1053 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SHROOM1Q2M3G4 852 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 NXNL1Q96CM4 212 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 KCTD15Q96SI1 283 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PVALEFA0A1B0GWK0 134 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 FAM86C2PA6NEL3 165 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 TFECO14948 347 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 KRT36O76013 467 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ME2P23368 584 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 FIGNQ5HY92 759 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 STRIP1Q5VSL9 837 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 NIM1KQ8IY84 436 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PROCA1Q8NCQ7 364 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 DEPTORQ8TB45 409 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 CHURC1Q8WUH1 139 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 TRIM2Q9C040 744 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 VPS11Q9H270 941 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SHOC2Q9UQ13 582 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 EDC4Q6P2E9 1401 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 KIAA0586Q9BVV6 1533 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 HNRNPDLO14979 420 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 HM13Q8TCT9 377 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ZNF496Q96IT1 587 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 MARCH7Q9H992 704 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 COPZ2Q9P299 210 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SEPT9Q9UHD8 586 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PTPRKQ15262 1439 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 E7EWF7 191 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 TGM2P21980 687 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 BRCC3P46736 316 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PI16Q6UXB8 463 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 DHRSXQ8N5I4 330 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 E2F7Q96AV8 911 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ART5Q96L15 291 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 MEIS3Q99687 375 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 E9PCH4 1651 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PRMT5O14744 637 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ITGA2P17301 1181 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 CXCR5P32302 372 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SDC2P34741 201 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 HSD17B4P51659 736 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ZNF135P52742 658 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 BNIP1Q12981 228 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SQLEQ14534 574 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 RNF43Q68DV7 783 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 MB21D1Q8N884 522 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 BSNDQ8WZ55 320 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PFDN5Q99471 154 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 GANQ9H2C0 597 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 IGSF9Q9P2J2 1179 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ZMYM2Q9UBW7 1377 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 CLCA1A8K7I4 914 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PEX14O75381 377 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PAICSP22234 425 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 IL32P24001 234 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 DRG2P55039 364 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 LRIF1Q5T3J3 769 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms