RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 FAM155BO75949 473 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 RECQL4O94761 1208 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 LMO2P25791 158 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 PCK1P35558 622 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 TAZQ16635 292 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 OLFML1Q6UWY5 402 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 GPR142Q7Z601 462 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 GJD2Q9UKL4 321 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 APOL1O14791 398 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 FGFR1P11362 822 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 NEFHP12036 1026 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 GRM5P41594 1212 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 NCALDP61601 193 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 ELF3P78545 371 aaPredicted RBP16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 POU5F1BQ06416 359 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 OVGP1Q12889 678 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 TFDP2Q14188 446 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 DGKDQ16760 1214 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 KBTBD12Q3ZCT8 623 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 EFHC2Q5JST6 749 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 PCDH19Q8TAB3 1148 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 KLHL29Q96CT2 875 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 SLC17A7Q9P2U7 560 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 PIN4Q9Y237 131 aaKnown RBP16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 IGF2BP3O00425 579 aaKnown RBP eCLIP16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 GABBR2O75899 941 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 ZNF200P98182 395 aaPredicted RBP16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 ACVR2BQ13705 512 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 TDRPQ86YL5 185 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 IFNLR1Q8IU57 520 aaPredicted RBP16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 MAP7D3Q8IWC1 876 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 TCP10LQ8TDR4 215 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 DNAJB3Q8WWF6 145 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 BRI3BPQ8WY22 251 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 MAML3Q96JK9 1138 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 KATNBL1Q9H079 304 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 PCDH18Q9HCL0 1135 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 SLC24A2Q9UI40 661 aa16.46■□□□□ 0.23
NCKIPSD-201ENST00000294129 TRIP12Q14669 1992 aaPredicted RBP16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 IL4RP24394 825 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 DENND1AQ8TEH3 1009 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 GCOM2Q9BZD3 368 aaPredicted RBP16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 ACSS3Q9H6R3 686 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 CACNG4Q9UBN1 327 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 TCRBV9S1A1TA0A576 114 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 GSCP56915 257 aaPredicted RBP16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 SLC6A3Q01959 620 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 GBE1Q04446 702 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 SOWAHAQ2M3V2 549 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 LDLRAD1Q5T700 205 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 PQLC3Q8N755 202 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 PPM1NQ8N819 430 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 ERP27Q96DN0 273 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 DCTN4Q9UJW0 460 aa16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 SMG5Q9UPR3 1016 aaKnown RBP16.45■□□□□ 0.22
NCKIPSD-201ENST00000294129 CHUKO15111 745 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 CYP2C9P11712 490 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 ATP2A2P16615 1042 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 HDAC4P56524 1084 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 PTK7Q13308 1070 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 ACAP1Q15027 740 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 KLHL38Q2WGJ6 581 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 DUSP28Q4G0W2 176 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 SLC27A1Q6PCB7 646 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 PRPF39Q86UA1 669 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 BEST2Q8NFU1 509 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 NPLOC4Q8TAT6 608 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 FAM149B1Q96BN6 582 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 NPHS2Q9NP85 383 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 PIH1D1Q9NWS0 290 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 MFHAS1Q9Y4C4 1052 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 MAD1L1Q9Y6D9 718 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 PLXNB2O15031 1838 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 A8MUI8 341 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 PRPF4O43172 522 aaKnown RBP eCLIP16.44■□□□□ 0.221e-7■■■■□ 26.7
NCKIPSD-201ENST00000294129 TYROBPO43914 113 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 INHBAP08476 426 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 RABGGTBP53611 331 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 FAM228AQ86W67 206 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 TMEM40Q8WWA1 233 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 SNX27Q96L92 541 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 TINF2Q9BSI4 451 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 SYT17Q9BSW7 474 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 MT-ND3P03897 115 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 GSTA1P08263 222 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 SMIM10L2AP0DMW4 78 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 SMIM10L2BP0DMW5 78 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 STIP1P31948 543 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 FAAP100Q0VG06 881 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 KYAT1Q16773 422 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 FAM47CQ5HY64 1035 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 ZNF449Q6P9G9 518 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 VSIG1Q86XK7 387 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 AGGF1Q8N302 714 aaeCLIP16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 DCAKDQ8WVC6 231 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 KHSRPQ92945 711 aaKnown RBP eCLIP16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 FRMD8P1Q9BZ68 369 aaPredicted RBP16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 USP29Q9HBJ7 922 aa16.44■□□□□ 0.22
NCKIPSD-201ENST00000294129 RXFP1Q9HBX9 757 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms