RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 C6orf222P0C671 652 aaPredicted RBP16.62■□□□□ 0.25
SSRP1-202ENST00000293880 GPC1P35052 558 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 CUL2Q13617 745 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 XKR3Q5GH77 459 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 SLC20A1Q8WUM9 679 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 PPP1R10Q96QC0 940 aaKnown RBP16.62■□□□□ 0.25
SSRP1-202ENST00000293880 CDC42EP4Q9H3Q1 356 aaKnown RBP16.62■□□□□ 0.25
SSRP1-202ENST00000293880 CACNA2D1P54289 1103 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 VAC14Q08AM6 782 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 ATAD3BQ5T9A4 648 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 CLEC4GQ6UXB4 293 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 DEFB107AQ8IZN7 70 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 UTP15Q8TED0 518 aaKnown RBP16.62■□□□□ 0.25
SSRP1-202ENST00000293880 DAGLAQ9Y4D2 1042 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 CNTNAP5Q8WYK1 1306 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 CLPTM1O96005 669 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 FYNP06241 537 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 ATP6AP1LQ52LC2 224 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 TBCELQ5QJ74 424 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 NAPEPLDQ6IQ20 393 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 ACOT1Q86TX2 421 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 RPS6KB2Q9UBS0 482 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 AP4S1Q9Y587 144 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 IL18RAPO95256 599 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 THRAP10827 490 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 ALOX12P18054 663 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 YY1P25490 414 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 SYTL1Q8IYJ3 562 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 RNF148Q8N7C7 305 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 MARK4Q96L34 752 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 ACOX2Q99424 681 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.62■□□□□ 0.25
SSRP1-202ENST00000293880 PRR12Q9ULL5 1215 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 ZNF862O60290 1169 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 CDH18Q13634 790 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 USP39Q53GS9 565 aaKnown RBP16.62■□□□□ 0.25
SSRP1-202ENST00000293880 ZNF57Q68EA5 555 aaPredicted RBP16.62■□□□□ 0.25
SSRP1-202ENST00000293880 TRIM48Q8IWZ4 208 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 SUGP1Q8IWZ8 645 aaKnown RBP16.62■□□□□ 0.25
SSRP1-202ENST00000293880 STKLD1Q8NE28 680 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 RAET1EQ8TD07 263 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 PCDHB7Q9Y5E2 793 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.62■□□□□ 0.25
SSRP1-202ENST00000293880 PNPLA7Q6ZV29 1317 aa16.62■□□□□ 0.25
SSRP1-202ENST00000293880 RAG1P15918 1043 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 MAPK7Q13164 816 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 ARMC4Q5T2S8 1044 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 SEL1L3Q68CR1 1132 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 TRIM63Q969Q1 353 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 PPP1R14BQ96C90 147 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 RMND5AQ9H871 391 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 IL1RAPL1Q9NZN1 696 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 RFX7Q2KHR2 1363 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 H2AFYO75367 372 aaKnown RBP16.61■□□□□ 0.25
SSRP1-202ENST00000293880 NFICP08651 508 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 MICALL2Q8IY33 904 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 PHF21BQ96EK2 531 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 DDX20Q9UHI6 824 aaKnown RBP16.61■□□□□ 0.25
SSRP1-202ENST00000293880 PCDHB2Q9Y5E7 798 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 N6AMT1Q9Y5N5 214 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 CYP2B6P20813 491 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 CCT8P50990 548 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 CHRNB3Q05901 458 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 OTUD3Q5T2D3 398 aaPredicted RBP16.61■□□□□ 0.25
SSRP1-202ENST00000293880 CDC42EP5Q6NZY7 148 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 SETD3Q86TU7 594 aaPredicted RBP16.61■□□□□ 0.25
SSRP1-202ENST00000293880 FAM228AQ86W67 206 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 KRT78Q8N1N4 520 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 ATG16L2Q8NAA4 619 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 DDI1Q8WTU0 396 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 TAAR1Q96RJ0 339 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 TBX20Q9UMR3 447 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 PSTPIP1O43586 416 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 SPAG6O75602 509 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 CYP7B1O75881 506 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 FDPSP14324 419 aaKnown RBP16.61■□□□□ 0.25
SSRP1-202ENST00000293880 TPH1P17752 444 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 PAN2Q504Q3 1202 aaKnown RBP16.61■□□□□ 0.25
SSRP1-202ENST00000293880 FOXR1Q6PIV2 292 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 TAF8Q7Z7C8 310 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 TARS2Q9BW92 718 aaKnown RBP16.61■□□□□ 0.25
SSRP1-202ENST00000293880 IL25Q9H293 177 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 STK39Q9UEW8 545 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 ARHGAP31Q2M1Z3 1444 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 FOXN3O00409 490 aaPredicted RBP16.61■□□□□ 0.25
SSRP1-202ENST00000293880 FAM86B2P0C5J1 330 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 SLC1A6P48664 564 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 ALDH9A1P49189 494 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 NYAP1Q6ZVC0 841 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 NIF3L1Q9GZT8 377 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 JMJD4Q9H9V9 463 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 POLR1BQ9H9Y6 1135 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 DDIT4Q9NX09 232 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 HPS5Q9UPZ3 1129 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 A2ML1A8K2U0 1454 aa16.61■□□□□ 0.25
SSRP1-202ENST00000293880 GNG14A0A1W2PPG7 69 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 ERI2A8K979 691 aaKnown RBP16.6■□□□□ 0.25
SSRP1-202ENST00000293880 SH3BGRLO75368 114 aa16.6■□□□□ 0.25
SSRP1-202ENST00000293880 CSDE1O75534 798 aaKnown RBP16.6■□□□□ 0.25
SSRP1-202ENST00000293880 DSG3P32926 999 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms