RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 COMMD8Q9NX08 183 aa10.09□□□□□ -0.79
HMHB1-201ENST00000289448 PCDHA5Q9Y5H7 936 aa10.09□□□□□ -0.79
HMHB1-201ENST00000289448 CCDC163A0A0D9SF12 145 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 DCLK1O15075 740 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 CYP26A1O43174 497 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 TLR5O60602 858 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 RPP40O75818 363 aaKnown RBP10.08□□□□□ -0.8
HMHB1-201ENST00000289448 FAM200BP0CF97 657 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 IRF1P10914 325 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 HNRNPLP14866 589 aaKnown RBP eCLIP10.08□□□□□ -0.8
HMHB1-201ENST00000289448 ATXN1P54253 815 aaKnown RBP10.08□□□□□ -0.8
HMHB1-201ENST00000289448 ZNF394Q53GI3 561 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 C2orf27AQ580R0 203 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 LY6G5CQ5SRR4 150 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 PPP1R26Q5T8A7 1209 aaPredicted RBP10.08□□□□□ -0.8
HMHB1-201ENST00000289448 EMC10Q5UCC4 262 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 KRT39Q6A163 491 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.08□□□□□ -0.8
HMHB1-201ENST00000289448 DDX42Q86XP3 938 aaKnown RBP eCLIP10.08□□□□□ -0.8
HMHB1-201ENST00000289448 TMEM25Q86YD3 366 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 BBS7Q8IWZ6 715 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 ZC3H3Q8IXZ2 948 aaKnown RBP10.08□□□□□ -0.8
HMHB1-201ENST00000289448 PHTF2Q8N3S3 785 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 CCDC33Q8N5R6 958 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 CAMKK1Q8N5S9 505 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 TATDN2Q93075 761 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 JAKMIP2Q96AA8 810 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 ANP32EQ9BTT0 268 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 NT5C1AQ9BXI3 368 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 KLF16Q9BXK1 252 aaPredicted RBP10.08□□□□□ -0.8
HMHB1-201ENST00000289448 NMUR1Q9HB89 426 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 SEMA4GQ9NTN9 838 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 SCML2Q9UQR0 700 aa10.08□□□□□ -0.8
HMHB1-201ENST00000289448 ABCA7Q8IZY2 2146 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 A0A0A0MRY4 1105 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 A0A1W2PQH9 124 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 TRIM49BA6NDI0 452 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 SLC9A3R1O14745 358 aaPredicted RBP10.07□□□□□ -0.8
HMHB1-201ENST00000289448 MDM4O15151 490 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 TRIM24O15164 1050 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 AXIN1O15169 862 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 CETN3O15182 167 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 GDF9O60383 454 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 LRP3O75074 770 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 APBB3O95704 486 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 ADH5P11766 374 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 ACO1P21399 889 aaKnown RBP10.07□□□□□ -0.8
HMHB1-201ENST00000289448 KIR2DL1P43626 348 aaPredicted RBP10.07□□□□□ -0.8
HMHB1-201ENST00000289448 MXI1P50539 228 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 KIF11P52732 1056 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 LMNB2Q03252 620 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 CCDC6Q16204 474 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 CSRP2Q16527 193 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 CBWD6Q4V339 395 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 COBLL1Q53SF7 1204 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 CBWD3Q5JTY5 395 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 CBWD5Q5RIA9 395 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 ZNF658Q5TYW1 1059 aaPredicted RBP10.07□□□□□ -0.8
HMHB1-201ENST00000289448 CACNA2D4Q7Z3S7 1137 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 SCD5Q86SK9 330 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 ETFBKMTQ8IXQ9 262 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 SLC4A11Q8NBS3 891 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 FBXL13Q8NEE6 735 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 EXOC4Q96A65 974 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 P2RY11Q96G91 374 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 GSDMAQ96QA5 445 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 IMPG2Q9BZV3 1241 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 FBXO44Q9H4M3 255 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 ZDHHC4Q9NPG8 344 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 CYLDQ9NQC7 956 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 CISHQ9NSE2 258 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 RAB20Q9NX57 234 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 TBC1D14Q9P2M4 693 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 EBF1Q9UH73 591 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 NUDT5Q9UKK9 219 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 HCN2Q9UL51 889 aa10.07□□□□□ -0.8
HMHB1-201ENST00000289448 MYO18AQ92614 2054 aaKnown RBP10.06□□□□□ -0.8
HMHB1-201ENST00000289448 MYO16Q9Y6X6 1858 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 DCDC2BA2VCK2 349 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 PRR5-ARHGAP8B1AHC4 643 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 SGK1O00141 431 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 HOXC11O43248 304 aaPredicted RBP10.06□□□□□ -0.8
HMHB1-201ENST00000289448 KAT7O95251 611 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 ADH1CP00326 375 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 CCDC192P0DO97 292 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 EPB41P11171 864 aaKnown RBP10.06□□□□□ -0.8
HMHB1-201ENST00000289448 CD44P16070 742 aaKnown RBP10.06□□□□□ -0.8
HMHB1-201ENST00000289448 BMP6P22004 513 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 RAD23BP54727 409 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 NUCB2P80303 420 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 ARHGAP8P85298 464 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 KDSRQ06136 332 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 PLK5Q496M5 336 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 ISM2Q6H9L7 571 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 TMEM92Q6UXU6 159 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 PRR23CQ6ZRP0 262 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 HTR3DQ70Z44 454 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 ALLCQ8N6M5 410 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 NAT16Q8N8M0 369 aa10.06□□□□□ -0.8
HMHB1-201ENST00000289448 IL17RCQ8NAC3 791 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms