RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 RAD23AP54725 363 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 PDK4Q16654 411 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 DUSP9Q99956 384 aaKnown RBP18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 MGRN1O60291 552 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 CD4P01730 458 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 FESP07332 822 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 NCALDP61601 193 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 CHRNB3Q05901 458 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 ACVR2BQ13705 512 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 DEFB107AQ8IZN7 70 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 ZCCHC7Q8N3Z6 543 aaKnown RBP18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 VCAM1P19320 739 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 BGNP21810 368 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 S100A1P23297 94 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 CASP4P49662 377 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 LAMC2Q13753 1193 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 OR6Y1Q8NGX8 325 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 POP5Q969H6 163 aaKnown RBP18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 ECSITQ9BQ95 431 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 TBC1D10AQ9BXI6 508 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 C8orf4Q9NR00 106 aa18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 PRMT7Q9NVM4 692 aaPredicted RBP18.08■□□□□ 0.49
PCDHA13-201ENST00000289272 ME2P23368 584 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 NCKAP1LP55160 1127 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 AUHQ13825 339 aaKnown RBP18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 SH3GL1Q99961 368 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 RAD21L1Q9H4I0 556 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 IFT172Q9UG01 1749 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 NCANO14594 1321 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 MYO5BQ9ULV0 1848 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 KBTBD13C9JR72 458 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 E5RI56 91 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 FOXN3O00409 490 aaPredicted RBP18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 ICAM1P05362 532 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 HABP4Q5JVS0 413 aaKnown RBP18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 DEPDC1Q5TB30 811 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 CCDC33Q8N5R6 958 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 AGR3Q8TD06 166 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 VPS50Q96JG6 964 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 APOL4Q9BPW4 351 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 MTFR1LQ9H019 292 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 TBX20Q9UMR3 447 aa18.08■□□□□ 0.48
PCDHA13-201ENST00000289272 C2CD2LO14523 706 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 GSCP56915 257 aaPredicted RBP18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 RRP1BQ14684 758 aaKnown RBP18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 MROH9Q5TGP6 573 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 GMCL1P1Q8NEA9 526 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 S100ZQ8WXG8 99 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 PCDHGB4Q9UN71 923 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 RIC1Q4ADV7 1423 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 SDR42E2A6NKP2 422 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 NNMTP40261 264 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 ZNF157P51786 506 aaPredicted RBP18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 PRKAA1Q13131 559 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 AGAP9Q5VTM2 703 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 DHDDSQ86SQ9 333 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 PNMA5Q96PV4 448 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 ERAP1Q9NZ08 941 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 KATNA1O75449 491 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 ACAT1P24752 427 aaKnown RBP18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 TKTP29401 623 aaKnown RBP18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 GTF2A2P52657 109 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 GJC2Q5T442 439 aaPredicted RBP18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 BBS7Q8IWZ6 715 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 LRRC39Q96DD0 335 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 ELMO2Q96JJ3 720 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 SIK3Q9Y2K2 1263 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 STX7O15400 261 aaKnown RBP18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 MED26O95402 600 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 C19orf60Q96EN9 201 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 TMEM109Q9BVC6 243 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 SH3GLB1Q9Y371 365 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 AK5Q9Y6K8 562 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 PBX1P40424 430 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 SPOCD1Q6ZMY3 1216 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 SETD9Q8NE22 299 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 NIF3L1Q9GZT8 377 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 AP3M1Q9Y2T2 418 aa18.07■□□□□ 0.48
PCDHA13-201ENST00000289272 PDZK1P1A8MUH7 402 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 PDE2AO00408 941 aaPredicted RBP18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 PHGDHO43175 533 aaKnown RBP18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 AKAP3O75969 853 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 ERFP50548 548 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 FNIP1Q8TF40 1166 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 PRCCQ92733 491 aaPredicted RBP18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 GLMNQ92990 594 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 VPS33AQ96AX1 596 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 WNK4Q96J92 1243 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 NDNQ99608 321 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 VPS9D1Q9Y2B5 631 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 CYP11B1P15538 503 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 CAP2P40123 477 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 CLVS1Q8IUQ0 354 aaPredicted RBP18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 MAB21L3Q8N8X9 362 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 FAM71DQ8N9W8 422 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 BDH2Q9BUT1 245 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 TRPC7Q9HCX4 862 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 FAM32AQ9Y421 112 aaKnown RBP18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 DPYSL4O14531 572 aa18.06■□□□□ 0.48
PCDHA13-201ENST00000289272 PDK3Q15120 406 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms