RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 TMEM184AQ6ZMB5 413 aa22.88■■□□□ 1.25
PDLIM3-203ENST00000284771 EMC1Q8N766 993 aa22.88■■□□□ 1.25
PDLIM3-203ENST00000284771 EFHBQ8N7U6 833 aa22.88■■□□□ 1.25
PDLIM3-203ENST00000284771 C12orf76Q8N812 135 aaPredicted RBP22.88■■□□□ 1.25
PDLIM3-203ENST00000284771 RFFLQ8WZ73 363 aa22.88■■□□□ 1.25
PDLIM3-203ENST00000284771 PPP2R3CQ969Q6 453 aa22.88■■□□□ 1.25
PDLIM3-203ENST00000284771 FLT3P36888 993 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 RNASE9P60153 205 aaKnown RBP22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 PLD1Q13393 1074 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 TCEAL1Q15170 157 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 DNAJC24Q6P3W2 148 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 TMEM150AQ86TG1 271 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 ZNF707Q96C28 371 aaPredicted RBP22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 TRMT2BQ96GJ1 504 aaKnown RBP22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 KCND1Q9NSA2 647 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 HCFC1R1Q9NWW0 138 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 COMMD8Q9NX08 183 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 GMIPQ9P107 970 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 CTTNBP2NLQ9P2B4 639 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 NOTCH4Q99466 2003 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 CCDC195A0A1B0GUA6 201 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 TMEM191CA6NGB0 347 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 BTNL10A8MVZ5 291 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 NRG2O14511 850 aaPredicted RBP22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 HOXA9P31269 272 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 SCNN1AP37088 669 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 YWHAZP63104 245 aaKnown RBP22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 OGDHQ02218 1023 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 ADAM15Q13444 863 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 VEPH1Q14D04 833 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 TMC8Q8IU68 726 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 HS6ST3Q8IZP7 471 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 IRGQQ8WZA9 623 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 FBXO32Q969P5 355 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 BTBD6Q96KE9 485 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 MCEEQ96PE7 176 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 SELENOOQ9BVL4 669 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 IL21Q9HBE4 155 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 ZDHHC7Q9NXF8 308 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 GUCA1BQ9UMX6 200 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 ASB3Q9Y575 518 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 PAXBP1Q9Y5B6 917 aa22.87■■□□□ 1.25
PDLIM3-203ENST00000284771 A0A0A6YYK5 440 aaPredicted RBP22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 A0A1W2PQH9 124 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 ZSCAN12O43309 604 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 BUB1O43683 1085 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 TADA3O75528 432 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 PAPLNO95428 1278 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 ZDHHC11BP0C7U3 371 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 EFHC1Q5JVL4 640 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 SYPL2Q5VXT5 272 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 BSPRYQ5W0U4 402 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 MON1AQ86VX9 555 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 FAM149B1Q96BN6 582 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 ZNF512Q96ME7 567 aaPredicted RBP22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 IRX2Q9BZI1 471 aaPredicted RBP22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 PRKD2Q9BZL6 878 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 MRPL47Q9HD33 250 aaKnown RBP22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 DNMT3BQ9UBC3 853 aaKnown RBP22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 DPP7Q9UHL4 492 aa22.86■■□□□ 1.25
PDLIM3-203ENST00000284771 C5orf42Q9H799 3197 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 MACROD2A1Z1Q3 448 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 LTFP02788 710 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 HNRNPA1P09651 372 aaKnown RBP eCLIP22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 DLX2Q07687 328 aaPredicted RBP22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 ZNF252P-AS1Q0IIN9 211 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 GPR153Q6NV75 609 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 ITIH5Q86UX2 942 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 RHOT2Q8IXI1 618 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 ZNF564Q8TBZ8 553 aaPredicted RBP22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 ADAM33Q9BZ11 813 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 UVRAGQ9P2Y5 699 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 NAALADL1Q9UQQ1 740 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 SCINQ9Y6U3 715 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 BRWD1Q9NSI6 2320 aa22.85■■□□□ 1.25
PDLIM3-203ENST00000284771 C2CD4BA6NLJ0 364 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 KRT86O43790 486 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 MTA2O94776 668 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 F11P03951 625 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 YWHAGP61981 247 aaKnown RBP eCLIP22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 TAF12Q16514 161 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 CTC1Q2NKJ3 1217 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 TMC5Q6UXY8 1006 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 GAREM2Q75VX8 874 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 ARCQ7LC44 396 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 EDEM1Q92611 657 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 CASP10Q92851 521 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 SLITRK1Q96PX8 696 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 CDX2Q99626 313 aaPredicted RBP22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 POPDC2Q9HBU9 364 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 ASNSD1Q9NWL6 643 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 CLEC1BQ9P126 229 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 ANAPC1Q9H1A4 1944 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 SART1O43290 800 aaKnown RBP22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 HSF2BPO75031 334 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 GLI1P08151 1106 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 CCR2P41597 374 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 DCUN1D2Q6PH85 259 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 SYCE2Q6PIF2 218 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 DEFB106AQ8N104 65 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms