RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 LAMA3Q16787 3333 aa19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 FAM92AA1XBS5 289 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 PDGFRAP16234 1089 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 PRLRP16471 622 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 SLC1A1P43005 524 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 ZNF143P52747 638 aaPredicted RBP19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 USP46P62068 366 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 MLLT1Q03111 559 aaPredicted RBP19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 IFRD2Q12894 506 aaPredicted RBP19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 TRNP1Q6NT89 227 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 PEX26Q7Z412 305 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 NT5DC3Q86UY8 548 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 NIPA2Q8N8Q9 360 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 STKLD1Q8NE28 680 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 GIPC2Q8TF65 315 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 RXFP2Q8WXD0 754 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 LMAN2LQ9H0V9 348 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 POPDC2Q9HBU9 364 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 SCML2Q9UQR0 700 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 CHD9Q3L8U1 2897 aa19.81■□□□□ 0.76
PDLIM3-202ENST00000284770 GLUD1P00367 558 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 C1RP00736 705 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 SPATA31D3P0C874 917 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 GPD1P21695 349 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 COMTP21964 271 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 PSMA2P25787 234 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 YWHAQP27348 245 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 MAN1A1P33908 653 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 SPATA31D4Q6ZUB0 917 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 HFE2Q6ZVN8 426 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 UBE2Q2Q8WVN8 375 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 FBXW11Q9UKB1 542 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 AMFRQ9UKV5 643 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 PACSIN2Q9UNF0 486 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 HYOU1Q9Y4L1 999 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 INSL5Q9Y5Q6 135 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 SLC38A8A6NNN8 435 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 DAB1O75553 588 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 LTFP02788 710 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 MATKP42679 507 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 CLCN4P51793 760 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 MTMR3Q13615 1198 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 ACAP1Q15027 740 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 KREMEN2Q8NCW0 462 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 MYRIPQ8NFW9 859 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 GOLGA1Q92805 767 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 SLC2A13Q96QE2 648 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 CNPY3Q9BT09 278 aa19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 DDX23Q9BUQ8 820 aaKnown RBP19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.8■□□□□ 0.76
PDLIM3-202ENST00000284770 CHD7Q9P2D1 2997 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 EPOPA6NHQ4 379 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 DPYSL4O14531 572 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 SRGAP2O75044 1071 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 FYNP06241 537 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 SDC4P31431 198 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 TWF1Q12792 350 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 PTPROQ16827 1216 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 CCDC14Q49A88 953 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 BSPRYQ5W0U4 402 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 CCDC149Q6ZUS6 474 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 MON1AQ86VX9 555 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 DEFB106AQ8N104 65 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 GDPD5Q8WTR4 605 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 OSBPL9Q96SU4 736 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 TRIM62Q9BVG3 475 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 TTLL2Q9BWV7 592 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 EHD2Q9NZN4 543 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 PDE4DIPQ5VU43 2346 aa19.79■□□□□ 0.76
PDLIM3-202ENST00000284770 SPOPO43791 374 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 CSH1P0DML2 217 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 CSH2P0DML3 217 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 NOS2P35228 1153 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 PTPN9P43378 593 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 TERF1P54274 439 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 PLD1Q13393 1074 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 BEND5Q7L4P6 421 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 CPNE8Q86YQ8 564 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 SLC7A14Q8TBB6 771 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 HES6Q96HZ4 224 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 CFAP57Q96MR6 1250 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 CAPN9O14815 690 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 CLASP2O75122 1294 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 SLU7O95391 586 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 TCP1P17987 556 aaKnown RBP19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 EPHB3P54753 998 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 YWHAGP61981 247 aaKnown RBP eCLIP19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 VEPH1Q14D04 833 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 WHAMMP3Q1A5X7 153 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 DCAF6Q58WW2 860 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 ARHGAP18Q8N392 663 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 CD101Q93033 1021 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 FBXO32Q969P5 355 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 ABCC13Q9NSE7 274 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 NAALADL1Q9UQQ1 740 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 USTQ9Y2C2 406 aa19.78■□□□□ 0.76
PDLIM3-202ENST00000284770 RNF8O76064 485 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 C8AP07357 584 aa19.77■□□□□ 0.76
PDLIM3-202ENST00000284770 NCAM1P13591 858 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms