RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 NFIBO00712 420 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 STK10O94804 968 aaKnown RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 VNN1O95497 513 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 TOP3BO95985 862 aaKnown RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 CD48P09326 243 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 TNNI1P19237 187 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 ELK3P41970 407 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 CDKN2BP42772 138 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 ARHGAP8P85298 464 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 TAF1CQ15572 869 aaPredicted RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 LIN52Q52LA3 116 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 ACBD5Q5T8D3 534 aaPredicted RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 CYP4A22Q5TCH4 519 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 C1orf146Q5VVC0 180 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 LCA5Q86VQ0 697 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 CLEC4DQ8WXI8 215 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 CNTN3Q9P232 1028 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 STRIP2Q9ULQ0 834 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 BUD23O43709 281 aaKnown RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 PENKP01210 267 aaPredicted RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 HARSP12081 509 aaKnown RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 PHBP35232 272 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 BASP1P80723 227 aaKnown RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 BST1Q10588 318 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 ZNF394Q53GI3 561 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 SFT2D3Q587I9 215 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 ZBTB41Q5SVQ8 909 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 DRICH1Q6PGQ1 229 aaPredicted RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 SH2D5Q6ZV89 423 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 SLC35B2Q8TB61 432 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 APOPT1Q96IL0 206 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 FBXL18Q96ME1 805 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 EBF4Q9BQW3 602 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 TUBB6Q9BUF5 446 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 ST6GALNAC4Q9H4F1 302 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 XPO7Q9UIA9 1087 aaKnown RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 DRG1Q9Y295 367 aaKnown RBP11.81□□□□□ -0.52
SCLT1-201ENST00000281142 CENPFP49454 3210 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 LCTP09848 1927 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 NFASCO94856 1347 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 TCRBV9S1A1TA0A576 114 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TMEM191CA6NGB0 347 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 A8MXQ7 604 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 KBTBD13C9JR72 458 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 ITGAVP06756 1048 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TMEM191BP0C7N4 346 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 MRPS9P82933 396 aaKnown RBP11.8□□□□□ -0.52
SCLT1-201ENST00000281142 PDE1BQ01064 536 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TMEM62Q0P6H9 643 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 CRHR2Q13324 411 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 SEZ6Q53EL9 994 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TFDP3Q5H9I0 405 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 C15orf39Q6ZRI6 1047 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 ZCCHC23Q6ZST2 131 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TMPRSS6Q8IU80 811 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 PPIL6Q8IXY8 311 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 GPD1LQ8N335 351 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 NKD2Q969F2 451 aaPredicted RBP11.8□□□□□ -0.52
SCLT1-201ENST00000281142 NR1H4Q96RI1 486 aaPredicted RBP11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TRIM56Q9BRZ2 755 aaKnown RBP11.8□□□□□ -0.52
SCLT1-201ENST00000281142 SHCBP1LQ9BZQ2 653 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 SMYD3Q9H7B4 428 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 AGO4Q9HCK5 861 aaKnown RBP11.8□□□□□ -0.52
SCLT1-201ENST00000281142 ETNK2Q9NVF9 386 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 IP6K2Q9UHH9 426 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 CPA4Q9UI42 421 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 LOXHD1Q8IVV2 1947 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 UGT1A9O60656 530 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 CCNE2O96020 404 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 CDK7P50613 346 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 NLRP11P59045 1033 aaKnown RBP11.8□□□□□ -0.52
SCLT1-201ENST00000281142 ACTR3P61158 418 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 SLC25A3Q00325 362 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 BMPR2Q13873 1038 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 GSTA3Q16772 222 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 KLHL38Q2WGJ6 581 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TKFCQ3LXA3 575 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TAS1R3Q7RTX0 852 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 PHF13Q86YI8 300 aaPredicted RBP11.8□□□□□ -0.52
SCLT1-201ENST00000281142 POU5F2Q8N7G0 328 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 FAM71DQ8N9W8 422 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 HIPK4Q8NE63 616 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 SRPK1Q96SB4 655 aaKnown RBP11.8□□□□□ -0.52
SCLT1-201ENST00000281142 SLC13A1Q9BZW2 595 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 UGT1A7Q9HAW7 530 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 UGT1A10Q9HAW8 530 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 UGT1A8Q9HAW9 530 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 RNF146Q9NTX7 359 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 PARVAQ9NVD7 372 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TJP2Q9UDY2 1190 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TMCO1Q9UM00 188 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 ZNF510Q9Y2H8 683 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 CST8O60676 142 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 MAGEC1O60732 1142 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TM7SF2O76062 418 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 TGDSO95455 350 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 AQP5P55064 265 aa11.8□□□□□ -0.52
SCLT1-201ENST00000281142 YWHAGP61981 247 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCLT1-201ENST00000281142 USP46P62068 366 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms