RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 MTCL1Q9Y4B5 1905 aaKnown RBP6.87□□□□□ -1.31
CD44-204ENST00000279452 XIRP2A4UGR9 3374 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 SOBPA7XYQ1 873 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 E5RJQ4 531 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 LEFTY2O00292 366 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 CAPN9O14815 690 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 EPHB6O15197 1021 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 CHADO15335 359 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 TBX18O95935 607 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 OAS1P00973 400 aaKnown RBP6.86□□□□□ -1.31
CD44-204ENST00000279452 PDGFBP01127 241 aaPredicted RBP6.86□□□□□ -1.31
CD44-204ENST00000279452 CYP11B1P15538 503 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 PFKLP17858 780 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 CLCN1P35523 988 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 SOX5P35711 763 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 SOX9P48436 509 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 PSEN1P49768 467 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 TUBP50607 506 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 TNK2Q07912 1038 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 EFEMP1Q12805 493 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 PDCLQ13371 301 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 UBXN2BQ14CS0 331 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 MLF2Q15773 248 aaPredicted RBP6.86□□□□□ -1.31
CD44-204ENST00000279452 ZNF77Q15935 545 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 SLC44A4Q53GD3 710 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 TRIM68Q6AZZ1 485 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 PMF1Q6P1K2 205 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 HFE2Q6ZVN8 426 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 CCDC186Q7Z3E2 898 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 DDX42Q86XP3 938 aaKnown RBP eCLIP6.86□□□□□ -1.31
CD44-204ENST00000279452 FAM71AQ8IYT1 594 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 CPA6Q8N4T0 437 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 CLEC4CQ8WTT0 213 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 KCTD13Q8WZ19 329 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 DNASE1L2Q92874 299 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 SHDQ96IW2 340 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 NAP1L5Q96NT1 182 aaPredicted RBP6.86□□□□□ -1.31
CD44-204ENST00000279452 ERGIC2Q96RQ1 377 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 CDK5RAP1Q96SZ6 601 aaKnown RBP6.86□□□□□ -1.31
CD44-204ENST00000279452 UBXN6Q9BZV1 441 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 RNF38Q9H0F5 515 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 EBF3Q9H4W6 596 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 TBC1D17Q9HA65 648 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 NMUR1Q9HB89 426 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 TRPV4Q9HBA0 871 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 RTN4Q9NQC3 1192 aaKnown RBP6.86□□□□□ -1.31
CD44-204ENST00000279452 CNGB3Q9NQW8 809 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 SLC2A4RGQ9NR83 387 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 GKN1Q9NS71 199 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 OSER1Q9NX31 292 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 DUS2Q9NX74 493 aaKnown RBP6.86□□□□□ -1.31
CD44-204ENST00000279452 OBP2AQ9NY56 170 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 GTSE1Q9NYZ3 720 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 IFNKQ9P0W0 207 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 DNMT3LQ9UJW3 386 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 LSM7Q9UK45 103 aaKnown RBP6.86□□□□□ -1.31
CD44-204ENST00000279452 NDRG2Q9UN36 371 aaKnown RBP6.86□□□□□ -1.31
CD44-204ENST00000279452 ARHGAP26Q9UNA1 814 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 CNTN6Q9UQ52 1028 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 SIK3Q9Y2K2 1263 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 DAAM1Q9Y4D1 1078 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 PIAS3Q9Y6X2 628 aa6.86□□□□□ -1.31
CD44-204ENST00000279452 A0A1B0GTH6 734 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 SLC12A8A0AV02 714 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 FAM92AA1XBS5 289 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 KRBA1A5PL33 1030 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 LRRC10BA6NIK2 292 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 YJEFN3A6XGL0 299 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 PRR33A8MZF0 331 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 E7ENQ6 273 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 SART1O43290 800 aaKnown RBP6.85□□□□□ -1.31
CD44-204ENST00000279452 CBFA2T2O43439 604 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 FBXO21O94952 628 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 MMEP08473 750 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 ZDHHC11BP0C7U3 371 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 CCDC172P0C7W6 258 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 ARSAP15289 507 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 CD72P21854 359 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 WEE1P30291 646 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 GPD2P43304 727 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 ACADSBP45954 432 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 PGFP49763 221 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 SNX16P57768 344 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 DAOAP59103 153 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 SLC7A9P82251 487 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 FCHO2Q0JRZ9 810 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 USP4Q13107 963 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 ZNF268Q14587 947 aaPredicted RBP6.85□□□□□ -1.31
CD44-204ENST00000279452 PDGFRLQ15198 375 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 ASIC2Q16515 512 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 ITPRIPL2Q3MIP1 535 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 PKDCCQ504Y2 493 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 RAB41Q5JT25 222 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 NAA35Q5VZE5 725 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 OR6B2Q6IFH4 312 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 APTXQ7Z2E3 356 aaKnown RBP6.85□□□□□ -1.31
CD44-204ENST00000279452 SCD5Q86SK9 330 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 NOP9Q86U38 636 aaKnown RBP6.85□□□□□ -1.31
CD44-204ENST00000279452 SCUBE3Q8IX30 993 aa6.85□□□□□ -1.31
CD44-204ENST00000279452 FBXL6Q8N531 539 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms